RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	RNF17	Q9BXT8	1623 aa	Known RBP	9.77	□□□□□ -0.85
HIPK1-210	ENST00000514621	MROH1	Q8NDA8	1641 aa		9.76	□□□□□ -0.85
HIPK1-210	ENST00000514621	PSME1	Q06323	249 aa		9.76	□□□□□ -0.85
HIPK1-210	ENST00000514621	TRIM22	Q8IYM9	498 aa		9.76	□□□□□ -0.85
HIPK1-210	ENST00000514621	TIMMDC1	Q9NPL8	285 aa		9.76	□□□□□ -0.85
HIPK1-210	ENST00000514621	NAIP	Q13075	1403 aa		9.75	□□□□□ -0.85
HIPK1-210	ENST00000514621	ATP1A2	P50993	1020 aa		9.75	□□□□□ -0.85
HIPK1-210	ENST00000514621	RIPOR1	Q6ZS17	1223 aa		9.75	□□□□□ -0.85
HIPK1-210	ENST00000514621	KDM5D	Q9BY66	1539 aa		9.75	□□□□□ -0.85
HIPK1-210	ENST00000514621	CLTC	Q00610	1675 aa	Known RBP	9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	ABCC3	O15438	1527 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	PRDM15	P57071	1507 aa	Predicted RBP	9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	FAM135A	Q9P2D6	1515 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	BACH1	O14867	736 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	GAS6	Q14393	721 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	DBN1	Q16643	649 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	GMCL1	Q96IK5	515 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	GAS2L1	Q99501	681 aa	Predicted RBP	9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	TFIP11	Q9UBB9	837 aa	Known RBP	9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	DEPDC5	O75140	1603 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	KANK1	Q14678	1352 aa		9.74	□□□□□ -0.85
HIPK1-210	ENST00000514621	HFM1	A2PYH4	1435 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	TMEM229A	B2RXF0	380 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	SMTN	P53814	917 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	RHBDD1	Q8TEB9	315 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	SLC4A9	Q96Q91	983 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	SERTAD1	Q9UHV2	236 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	MROH2A	A6NES4	1674 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	C3	P01024	1663 aa		9.73	□□□□□ -0.85
HIPK1-210	ENST00000514621	VWDE	Q8N2E2	1590 aa		9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621		H7C1W4	665 aa		9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621	SLURP2	P0DP57	97 aa		9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621	C4orf17	Q53FE4	359 aa		9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621	PPP1R12C	Q9BZL4	782 aa		9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621	MKRN1	Q9UHC7	482 aa	Known RBP	9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621	MAFB	Q9Y5Q3	323 aa	Predicted RBP	9.72	□□□□□ -0.85
HIPK1-210	ENST00000514621		A0A1B0GTH6	734 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	PALM3	A6NDB9	673 aa	Predicted RBP	9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	F11	P03951	625 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	PHKA2	P46019	1235 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	ZMYND15	Q9H091	742 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	NUP155	O75694	1391 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	NPAT	Q14207	1427 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	UNC13B	O14795	1591 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	GCC2	Q8IWJ2	1684 aa		9.71	□□□□□ -0.86
HIPK1-210	ENST00000514621	GPR25	O00155	361 aa		9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621	GTPBP3	Q969Y2	492 aa	Known RBP	9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621	NIFK	Q9BYG3	293 aa	Known RBP	9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621	DNAAF2	Q9NVR5	837 aa	Known RBP	9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621	PZP	P20742	1482 aa		9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621	LMTK2	Q8IWU2	1503 aa		9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621	ZC3H13	Q5T200	1668 aa	Known RBP	9.7	□□□□□ -0.86
HIPK1-210	ENST00000514621		A6NJY4	79 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	CDK2AP1	O14519	115 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	CEP152	O94986	1710 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	THBS1	P07996	1170 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	MTFR1	Q15390	333 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	ARHGAP31	Q2M1Z3	1444 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	ZNF385C	Q66K41	422 aa	Predicted RBP	9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	FOXR1	Q6PIV2	292 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	LARGE2	Q8N3Y3	721 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	OGFOD1	Q8N543	542 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	SETD5	Q9C0A6	1442 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	GPAM	Q9HCL2	828 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	ZNF358	Q9NW07	568 aa		9.69	□□□□□ -0.86
HIPK1-210	ENST00000514621	CAMSAP1	Q5T5Y3	1602 aa		9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	CLDN10	P78369	228 aa		9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	CCDC102B	Q68D86	513 aa		9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	TPCN2	Q8NHX9	752 aa		9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	WHAMM	Q8TF30	809 aa		9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	NUCKS1	Q9H1E3	243 aa	Known RBP	9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	RBM19	Q9Y4C8	960 aa	Known RBP	9.68	□□□□□ -0.86
HIPK1-210	ENST00000514621	TNR	Q92752	1358 aa		9.67	□□□□□ -0.86
HIPK1-210	ENST00000514621	ZBTB7B	O15156	539 aa	Predicted RBP	9.67	□□□□□ -0.86
HIPK1-210	ENST00000514621	ADAMTS2	O95450	1211 aa		9.67	□□□□□ -0.86
HIPK1-210	ENST00000514621	IQGAP3	Q86VI3	1631 aa		9.67	□□□□□ -0.86
HIPK1-210	ENST00000514621	ERVK-7	P63135	1459 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	LMTK3	Q96Q04	1460 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	UHRF1BP1	Q6BDS2	1440 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	CSB-PGBD3	P0DP91	1061 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	RASA1	P20936	1047 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	PLA2G4A	P47712	749 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	SRSF11	Q05519	484 aa	Known RBP	9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	PGBD3	Q8N328	593 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	KIAA1024	Q9UPX6	916 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	EFCAB6	Q5THR3	1501 aa		9.66	□□□□□ -0.86
HIPK1-210	ENST00000514621	RAB3GAP2	Q9H2M9	1393 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	SETD1B	Q9UPS6	1966 aa	Known RBP	9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	MSX1	P28360	303 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	LMOD1	P29536	600 aa	Predicted RBP	9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	HSPA2	P54652	639 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	ZNF295-AS1	Q8N0V1	137 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	SVOP	Q8N4V2	548 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	MBIP	Q9NS73	344 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	SCHIP1	Q9P0W5	487 aa	Predicted RBP	9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	SPATA31D1	Q6ZQQ2	1576 aa		9.65	□□□□□ -0.86
HIPK1-210	ENST00000514621	TET3	O43151	1660 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	PREX1	Q8TCU6	1659 aa		9.64	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms