RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
DDR1-275ENST00000514434 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
DDR1-275ENST00000514434 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
DDR1-275ENST00000514434 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
DDR1-275ENST00000514434 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
DDR1-275ENST00000514434 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
DDR1-275ENST00000514434 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
DDR1-275ENST00000514434 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
DDR1-275ENST00000514434 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
DDR1-275ENST00000514434 C7orf43Q8WVR3 580 aa16.9■□□□□ 0.3
DDR1-275ENST00000514434 FER1L6Q2WGJ9 1857 aa16.89■□□□□ 0.29
DDR1-275ENST00000514434 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
DDR1-275ENST00000514434 CRY2Q49AN0 593 aa16.89■□□□□ 0.29
DDR1-275ENST00000514434 SYNE4Q8N205 404 aa16.89■□□□□ 0.29
DDR1-275ENST00000514434 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
DDR1-275ENST00000514434 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.29
DDR1-275ENST00000514434 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
DDR1-275ENST00000514434 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
DDR1-275ENST00000514434 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
DDR1-275ENST00000514434 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
DDR1-275ENST00000514434 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
DDR1-275ENST00000514434 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
DDR1-275ENST00000514434 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
DDR1-275ENST00000514434 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
DDR1-275ENST00000514434 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
DDR1-275ENST00000514434 ZNF277Q9NRM2 450 aaPredicted RBP16.87■□□□□ 0.29
DDR1-275ENST00000514434 LTBP3Q9NS15 1303 aa16.87■□□□□ 0.29
DDR1-275ENST00000514434 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 TOMM70O94826 608 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
DDR1-275ENST00000514434 GOLGA2Q08379 1002 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
DDR1-275ENST00000514434 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
DDR1-275ENST00000514434 ANKRD36CQ5JPF3 1778 aa16.86■□□□□ 0.29
DDR1-275ENST00000514434 TIAM2Q8IVF5 1701 aa16.85■□□□□ 0.29
DDR1-275ENST00000514434 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-275ENST00000514434 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
DDR1-275ENST00000514434 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
DDR1-275ENST00000514434 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
DDR1-275ENST00000514434 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
DDR1-275ENST00000514434 CRAMP1Q96RY5 1269 aa16.84■□□□□ 0.29
DDR1-275ENST00000514434 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
DDR1-275ENST00000514434 RIC1Q4ADV7 1423 aa16.84■□□□□ 0.29
DDR1-275ENST00000514434 PPEF1O14829 653 aaPredicted RBP16.83■□□□□ 0.28
DDR1-275ENST00000514434 HSPA6P17066 643 aa16.83■□□□□ 0.28
DDR1-275ENST00000514434 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
DDR1-275ENST00000514434 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
DDR1-275ENST00000514434 MYD88Q99836 296 aa16.83■□□□□ 0.28
DDR1-275ENST00000514434 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
DDR1-275ENST00000514434 ABCC4O15439 1325 aa16.82■□□□□ 0.28
DDR1-275ENST00000514434 DDNO94850 711 aaPredicted RBP16.82■□□□□ 0.28
DDR1-275ENST00000514434 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
DDR1-275ENST00000514434 IL16Q14005 1332 aa16.81■□□□□ 0.28
DDR1-275ENST00000514434 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
DDR1-275ENST00000514434 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
DDR1-275ENST00000514434 IARSP41252 1262 aaKnown RBP16.81■□□□□ 0.28
DDR1-275ENST00000514434 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
DDR1-275ENST00000514434 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
DDR1-275ENST00000514434 TMX4Q9H1E5 349 aaPredicted RBP16.81■□□□□ 0.28
DDR1-275ENST00000514434 DDX58O95786 925 aaKnown RBP16.8■□□□□ 0.28
DDR1-275ENST00000514434 CC2D2BQ6DHV5 1058 aa16.8■□□□□ 0.28
DDR1-275ENST00000514434 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
DDR1-275ENST00000514434 RBM46Q8TBY0 533 aaKnown RBP16.8■□□□□ 0.28
DDR1-275ENST00000514434 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
DDR1-275ENST00000514434 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
DDR1-275ENST00000514434 G2E3Q7L622 706 aa16.79■□□□□ 0.28
DDR1-275ENST00000514434 PSMD1Q99460 953 aa16.79■□□□□ 0.28
DDR1-275ENST00000514434 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
DDR1-275ENST00000514434 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
DDR1-275ENST00000514434 POTECB2RU33 542 aa16.78■□□□□ 0.28
DDR1-275ENST00000514434 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
DDR1-275ENST00000514434 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
DDR1-275ENST00000514434 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
DDR1-275ENST00000514434 TRIM28Q13263 835 aaKnown RBP16.78■□□□□ 0.28
DDR1-275ENST00000514434 METTL22Q9BUU2 404 aaPredicted RBP16.78■□□□□ 0.28
DDR1-275ENST00000514434 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
DDR1-275ENST00000514434 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
DDR1-275ENST00000514434 LAMB2P55268 1798 aa16.78■□□□□ 0.28
DDR1-275ENST00000514434 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.28
DDR1-275ENST00000514434 BBOX1O75936 387 aa16.77■□□□□ 0.28
DDR1-275ENST00000514434 KSR2Q6VAB6 950 aa16.77■□□□□ 0.28
DDR1-275ENST00000514434 LARGE2Q8N3Y3 721 aa16.77■□□□□ 0.28
DDR1-275ENST00000514434 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.28
DDR1-275ENST00000514434 JDP2Q8WYK2 163 aa16.77■□□□□ 0.28
DDR1-275ENST00000514434 TAF1P21675 1872 aa16.77■□□□□ 0.27
DDR1-275ENST00000514434 SNED1Q8TER0 1413 aa16.77■□□□□ 0.27
DDR1-275ENST00000514434 GRAPQ13588 217 aa16.76■□□□□ 0.27
DDR1-275ENST00000514434 ZBTB38Q8NAP3 1195 aaPredicted RBP16.76■□□□□ 0.27
DDR1-275ENST00000514434 GRAPLQ8TC17 118 aaPredicted RBP16.76■□□□□ 0.27
DDR1-275ENST00000514434 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
DDR1-275ENST00000514434 PPIP5K2O43314 1243 aa16.75■□□□□ 0.27
DDR1-275ENST00000514434 VAMP4O75379 141 aa16.75■□□□□ 0.27
DDR1-275ENST00000514434 FSTL1Q12841 308 aa16.75■□□□□ 0.27
DDR1-275ENST00000514434 GRIPAP1Q4V328 841 aa16.75■□□□□ 0.27
DDR1-275ENST00000514434 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
DDR1-275ENST00000514434 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
DDR1-275ENST00000514434 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms