RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 SPEM2Q0P670 501 aa10.6□□□□□ -0.71
PDE4D-221ENST00000514231 FKBP5Q13451 457 aaPredicted RBP10.6□□□□□ -0.71
PDE4D-221ENST00000514231 GRIN2CQ14957 1233 aa10.6□□□□□ -0.71
PDE4D-221ENST00000514231 SLC30A3Q99726 388 aa10.6□□□□□ -0.71
PDE4D-221ENST00000514231 SIN3BO75182 1162 aa10.59□□□□□ -0.71
PDE4D-221ENST00000514231 PPP1R15AO75807 674 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-221ENST00000514231 NEUROD1Q13562 356 aa10.59□□□□□ -0.71
PDE4D-221ENST00000514231 TMEM151AQ8N4L1 468 aa10.59□□□□□ -0.71
PDE4D-221ENST00000514231 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
PDE4D-221ENST00000514231 COL26A1Q96A83 441 aa10.59□□□□□ -0.71
PDE4D-221ENST00000514231 KLK14Q9P0G3 267 aa10.59□□□□□ -0.71
PDE4D-221ENST00000514231 GDF11O95390 407 aa10.58□□□□□ -0.72
PDE4D-221ENST00000514231 AMPD1P23109 780 aa10.58□□□□□ -0.72
PDE4D-221ENST00000514231 SNRPNP63162 240 aaKnown RBP10.58□□□□□ -0.72
PDE4D-221ENST00000514231 DGKZQ13574 1117 aa10.58□□□□□ -0.72
PDE4D-221ENST00000514231 EFCC1Q9HA90 598 aa10.58□□□□□ -0.72
PDE4D-221ENST00000514231 HOXB4P17483 251 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-221ENST00000514231 RRAGCQ9HB90 399 aa10.57□□□□□ -0.72
PDE4D-221ENST00000514231 CXXC1Q9P0U4 656 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-221ENST00000514231 LRFN2Q9ULH4 789 aa10.57□□□□□ -0.72
PDE4D-221ENST00000514231 MKL2Q9ULH7 1088 aa10.57□□□□□ -0.72
PDE4D-221ENST00000514231 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
PDE4D-221ENST00000514231 ELOA3DA6NLF2 546 aaPredicted RBP10.56□□□□□ -0.72
PDE4D-221ENST00000514231 ADARB2-AS1A8MUL3 147 aa10.56□□□□□ -0.72
PDE4D-221ENST00000514231 ALAS2P22557 587 aa10.56□□□□□ -0.72
PDE4D-221ENST00000514231 ELOA3BQ3SY89 546 aa10.56□□□□□ -0.72
PDE4D-221ENST00000514231 ELOA3Q8NG57 546 aa10.56□□□□□ -0.72
PDE4D-221ENST00000514231 MDFIQ99750 246 aa10.56□□□□□ -0.72
PDE4D-221ENST00000514231 INPP5BP32019 993 aa10.55□□□□□ -0.72
PDE4D-221ENST00000514231 COX20Q5RI15 118 aa10.55□□□□□ -0.72
PDE4D-221ENST00000514231 LINC00114Q6XXX2 140 aa10.55□□□□□ -0.72
PDE4D-221ENST00000514231 CHSY3Q70JA7 882 aa10.55□□□□□ -0.72
PDE4D-221ENST00000514231 TNFRSF25Q93038 417 aa10.55□□□□□ -0.72
PDE4D-221ENST00000514231 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
PDE4D-221ENST00000514231 MICAL2O94851 1124 aa10.54□□□□□ -0.72
PDE4D-221ENST00000514231 EPB42P16452 691 aa10.54□□□□□ -0.72
PDE4D-221ENST00000514231 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
PDE4D-221ENST00000514231 GSX2Q9BZM3 304 aa10.54□□□□□ -0.72
PDE4D-221ENST00000514231 PIK3R2O00459 728 aa10.53□□□□□ -0.72
PDE4D-221ENST00000514231 PTCD1O75127 700 aaKnown RBP10.53□□□□□ -0.72
PDE4D-221ENST00000514231 IDH3AP50213 366 aa10.53□□□□□ -0.72
PDE4D-221ENST00000514231 DGKGP49619 791 aa10.52□□□□□ -0.73
PDE4D-221ENST00000514231 C16orf46Q6P387 395 aa10.52□□□□□ -0.73
PDE4D-221ENST00000514231 ARSDP51689 593 aa10.51□□□□□ -0.73
PDE4D-221ENST00000514231 CCINQ13939 588 aa10.51□□□□□ -0.73
PDE4D-221ENST00000514231 RAB44Q7Z6P3 723 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-221ENST00000514231 BHMTQ93088 406 aa10.51□□□□□ -0.73
PDE4D-221ENST00000514231 SLAIN2Q9P270 581 aa10.51□□□□□ -0.73
PDE4D-221ENST00000514231 OPLAHO14841 1288 aa10.5□□□□□ -0.73
PDE4D-221ENST00000514231 BRD2P25440 801 aaKnown RBP10.5□□□□□ -0.73
PDE4D-221ENST00000514231 GRNP28799 593 aaKnown RBP10.5□□□□□ -0.73
PDE4D-221ENST00000514231 SAP130Q9H0E3 1048 aa10.5□□□□□ -0.73
PDE4D-221ENST00000514231 GNB5O14775 395 aa10.49□□□□□ -0.73
PDE4D-221ENST00000514231 ATP2B4P23634 1241 aa10.49□□□□□ -0.73
PDE4D-221ENST00000514231 CAPN12Q6ZSI9 719 aa10.49□□□□□ -0.73
PDE4D-221ENST00000514231 TREML1Q86YW5 311 aa10.49□□□□□ -0.73
PDE4D-221ENST00000514231 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.49□□□□□ -0.73
PDE4D-221ENST00000514231 ALYREFQ86V81 257 aaKnown RBP10.48□□□□□ -0.73
PDE4D-221ENST00000514231 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
PDE4D-221ENST00000514231 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
PDE4D-221ENST00000514231 MKNK1Q9BUB5 465 aa10.48□□□□□ -0.73
PDE4D-221ENST00000514231 TMEM88BA6NKF7 163 aa10.47□□□□□ -0.73
PDE4D-221ENST00000514231 ADH7P40394 386 aa10.47□□□□□ -0.73
PDE4D-221ENST00000514231 NAA30Q147X3 362 aaPredicted RBP10.47□□□□□ -0.73
PDE4D-221ENST00000514231 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
PDE4D-221ENST00000514231 RTCBQ9Y3I0 505 aaKnown RBP10.46□□□□□ -0.73
PDE4D-221ENST00000514231 MAP3K6O95382 1288 aa10.45□□□□□ -0.74
PDE4D-221ENST00000514231 EGFRP00533 1210 aa10.45□□□□□ -0.74
PDE4D-221ENST00000514231 ETFBKMTQ8IXQ9 262 aa10.45□□□□□ -0.74
PDE4D-221ENST00000514231 STARD13Q9Y3M8 1113 aa10.45□□□□□ -0.74
PDE4D-221ENST00000514231 TNFRSF10BO14763 440 aa10.44□□□□□ -0.74
PDE4D-221ENST00000514231 NFKB1P19838 968 aa10.44□□□□□ -0.74
PDE4D-221ENST00000514231 UBE2OQ9C0C9 1292 aaKnown RBP10.44□□□□□ -0.74
PDE4D-221ENST00000514231 PRDM6Q9NQX0 595 aa10.44□□□□□ -0.74
PDE4D-221ENST00000514231 NOP53Q9NZM5 478 aaKnown RBP10.44□□□□□ -0.74
PDE4D-221ENST00000514231 COL8A1P27658 744 aa10.43□□□□□ -0.74
PDE4D-221ENST00000514231 PCSK7Q16549 785 aa10.43□□□□□ -0.74
PDE4D-221ENST00000514231 MICALL1Q8N3F8 863 aa10.43□□□□□ -0.74
PDE4D-221ENST00000514231 SUV39H2Q9H5I1 410 aa10.43□□□□□ -0.74
PDE4D-221ENST00000514231 IGFLR1Q9H665 355 aa10.43□□□□□ -0.74
PDE4D-221ENST00000514231 STIM2Q9P246 746 aa10.43□□□□□ -0.74
PDE4D-221ENST00000514231 TARSP26639 723 aaKnown RBP10.42□□□□□ -0.74
PDE4D-221ENST00000514231 SSFA2P28290 1259 aa10.42□□□□□ -0.74
PDE4D-221ENST00000514231 C20orf204Q6ZNR8 217 aa10.42□□□□□ -0.74
PDE4D-221ENST00000514231 RGL4Q8IZJ4 473 aa10.42□□□□□ -0.74
PDE4D-221ENST00000514231 CMTR1Q8N1G2 835 aaKnown RBP10.42□□□□□ -0.74
PDE4D-221ENST00000514231 M0R082 166 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 SASH3O75995 380 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 IGHA1P01876 353 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 FAM26DQ5JW98 314 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 ZNF417Q8TAU3 575 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 ZNF587Q96SQ5 575 aaPredicted RBP10.41□□□□□ -0.74
PDE4D-221ENST00000514231 DNAJB12Q9NXW2 375 aaKnown RBP10.41□□□□□ -0.74
PDE4D-221ENST00000514231 FAM13BQ9NYF5 915 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 ZFATQ9P243 1243 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 SLC6A14Q9UN76 642 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 USP20Q9Y2K6 914 aa10.41□□□□□ -0.74
PDE4D-221ENST00000514231 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
PDE4D-221ENST00000514231 XYLBO75191 536 aa10.4□□□□□ -0.74
PDE4D-221ENST00000514231 TRIM11Q96F44 468 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms