RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 KCNQ3O43525 872 aa11.54□□□□□ -0.56
CAST-240ENST00000514055 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
CAST-240ENST00000514055 LMOD1P29536 600 aaPredicted RBP11.54□□□□□ -0.56
CAST-240ENST00000514055 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
CAST-240ENST00000514055 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAST-240ENST00000514055 PRPF38BQ5VTL8 546 aaKnown RBP11.54□□□□□ -0.56
CAST-240ENST00000514055 DZIP3Q86Y13 1208 aaKnown RBP11.54□□□□□ -0.56
CAST-240ENST00000514055 GLIS2Q9BZE0 524 aaPredicted RBP11.54□□□□□ -0.56
CAST-240ENST00000514055 TRPM7Q96QT4 1865 aa11.54□□□□□ -0.56
CAST-240ENST00000514055 CA12O43570 354 aa11.53□□□□□ -0.56
CAST-240ENST00000514055 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
CAST-240ENST00000514055 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
CAST-240ENST00000514055 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
CAST-240ENST00000514055 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
CAST-240ENST00000514055 ZNF790Q6PG37 636 aa11.52□□□□□ -0.57
CAST-240ENST00000514055 DLK2Q6UY11 383 aa11.52□□□□□ -0.57
CAST-240ENST00000514055 USP50Q70EL3 339 aaPredicted RBP11.52□□□□□ -0.57
CAST-240ENST00000514055 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
CAST-240ENST00000514055 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
CAST-240ENST00000514055 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
CAST-240ENST00000514055 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
CAST-240ENST00000514055 PSMD1Q99460 953 aa11.51□□□□□ -0.57
CAST-240ENST00000514055 USP16Q9Y5T5 823 aa11.51□□□□□ -0.57
CAST-240ENST00000514055 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
CAST-240ENST00000514055 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
CAST-240ENST00000514055 LARGE2Q8N3Y3 721 aa11.5□□□□□ -0.57
CAST-240ENST00000514055 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
CAST-240ENST00000514055 NIP7Q9Y221 180 aaKnown RBP eCLIP11.5□□□□□ -0.57
CAST-240ENST00000514055 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.57
CAST-240ENST00000514055 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
CAST-240ENST00000514055 ABCC12Q96J65 1359 aa11.49□□□□□ -0.57
CAST-240ENST00000514055 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 NEFMP07197 916 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 ALDH1B1P30837 517 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
CAST-240ENST00000514055 HLFQ16534 295 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 TPTE2Q6XPS3 522 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 NUTM1Q86Y26 1132 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 GAS2L2Q8NHY3 880 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 HHIPL1Q96JK4 782 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 ADARB2Q9NS39 739 aaKnown RBP11.48□□□□□ -0.57
CAST-240ENST00000514055 GPRC5DQ9NZD1 345 aa11.48□□□□□ -0.57
CAST-240ENST00000514055 GMPSP49915 693 aaPredicted RBP11.47□□□□□ -0.57
CAST-240ENST00000514055 TEFQ10587 303 aa11.47□□□□□ -0.57
CAST-240ENST00000514055 CCDC184Q52MB2 194 aa11.47□□□□□ -0.57
CAST-240ENST00000514055 CLEC4GQ6UXB4 293 aa11.47□□□□□ -0.57
CAST-240ENST00000514055 TRPM4Q8TD43 1214 aa11.47□□□□□ -0.57
CAST-240ENST00000514055 PHACTR3Q96KR7 559 aa11.47□□□□□ -0.57
CAST-240ENST00000514055 PNNQ9H307 717 aaKnown RBP11.47□□□□□ -0.57
CAST-240ENST00000514055 MRS2Q9HD23 443 aa11.47□□□□□ -0.57
CAST-240ENST00000514055 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.57
CAST-240ENST00000514055 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 TRPA1O75762 1119 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 HUNKP57058 714 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 CXCL9Q07325 125 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 NOGQ13253 232 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 AOC3Q16853 763 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.57
CAST-240ENST00000514055 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.57
CAST-240ENST00000514055 USP48Q86UV5 1035 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 NIM1KQ8IY84 436 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 NBPF15Q8N660 670 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.57
CAST-240ENST00000514055 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.58
CAST-240ENST00000514055 PPIP5K2O43314 1243 aa11.45□□□□□ -0.58
CAST-240ENST00000514055 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
CAST-240ENST00000514055 KIF23Q02241 960 aaPredicted RBP11.45□□□□□ -0.58
CAST-240ENST00000514055 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
CAST-240ENST00000514055 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
CAST-240ENST00000514055 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
CAST-240ENST00000514055 RNF186Q9NXI6 227 aa11.45□□□□□ -0.58
CAST-240ENST00000514055 PGAP2Q9UHJ9 254 aa11.45□□□□□ -0.58
CAST-240ENST00000514055 BTBD11A6QL63 1104 aa11.44□□□□□ -0.58
CAST-240ENST00000514055 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
CAST-240ENST00000514055 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
CAST-240ENST00000514055 HPS5Q9UPZ3 1129 aa11.44□□□□□ -0.58
CAST-240ENST00000514055 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
CAST-240ENST00000514055 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
CAST-240ENST00000514055 RGMBQ6NW40 437 aa11.43□□□□□ -0.58
CAST-240ENST00000514055 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
CAST-240ENST00000514055 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
CAST-240ENST00000514055 RAD17O75943 681 aa11.42□□□□□ -0.58
CAST-240ENST00000514055 HOXA10P31260 410 aaPredicted RBP11.42□□□□□ -0.58
CAST-240ENST00000514055 CDC37L1Q7L3B6 337 aa11.42□□□□□ -0.58
CAST-240ENST00000514055 RPGRQ92834 1020 aaKnown RBP11.42□□□□□ -0.58
CAST-240ENST00000514055 RUNDC1Q96C34 613 aa11.42□□□□□ -0.58
CAST-240ENST00000514055 SAGE1Q9NXZ1 904 aa11.42□□□□□ -0.58
CAST-240ENST00000514055 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
CAST-240ENST00000514055 HABP4Q5JVS0 413 aaKnown RBP11.41□□□□□ -0.58
CAST-240ENST00000514055 NGEFQ8N5V2 710 aa11.41□□□□□ -0.58
CAST-240ENST00000514055 PNISRQ8TF01 805 aaKnown RBP11.41□□□□□ -0.58
CAST-240ENST00000514055 RTF1Q92541 710 aaKnown RBP11.41□□□□□ -0.58
CAST-240ENST00000514055 CSRNP1Q96S65 589 aa11.41□□□□□ -0.58
CAST-240ENST00000514055 BCL2L13Q9BXK5 485 aa11.41□□□□□ -0.58
CAST-240ENST00000514055 ZNRF3Q9ULT6 936 aa11.41□□□□□ -0.58
CAST-240ENST00000514055 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
CAST-240ENST00000514055 ADM5C9JUS6 153 aa11.4□□□□□ -0.58
CAST-240ENST00000514055 EGFRP00533 1210 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms