RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P17-201ENST00000513734 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 PLA2G2EQ9NZK7 142 aa9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 NOVA2Q9UNW9 492 aaKnown RBP9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 NOD1Q9Y239 953 aa9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 MAP4K5Q9Y4K4 846 aa9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 EP400Q96L91 3159 aa9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 ABCC11Q96J66 1382 aa9.35□□□□□ -0.91
HMGN1P17-201ENST00000513734 AFF2P51816 1311 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 ADGRB2O60241 1585 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L12C9JPN9 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L21D6R901 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 INTS6LQ5JSJ4 861 aaKnown RBP9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 C14orf93Q9H972 538 aaKnown RBP9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
HMGN1P17-201ENST00000513734 DLC1Q96QB1 1528 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 FAM196BA6NMK8 535 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 AEBP1Q8IUX7 1158 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 DHX57Q6P158 1386 aaKnown RBP9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
HMGN1P17-201ENST00000513734 PLCH1Q4KWH8 1693 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 CRYBG1Q9Y4K1 1723 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 ERVH48-1M5A8F1 160 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 ADAMTS2O95450 1211 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 FSHRP23945 695 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 CLDN10P78369 228 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 USP4Q13107 963 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 PTK7Q13308 1070 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 ELOAQ14241 798 aaKnown RBP9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 SPRYD7Q5W111 196 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 LRRC59Q96AG4 307 aaKnown RBP9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 ZNF594Q96JF6 807 aaPredicted RBP9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 MRGPRX2Q96LB1 330 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 ZMIZ1Q9ULJ6 1067 aa9.32□□□□□ -0.92
HMGN1P17-201ENST00000513734 KIAA1210Q9ULL0 1709 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 WNT7AO00755 349 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 SIAH2O43255 324 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 FOXO3O43524 673 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 GRM5P41594 1212 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 ATP1A2P50993 1020 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 GTF2IP78347 998 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 C8orf37Q96NL8 207 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 PRAM1Q96QH2 718 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 ALS2Q96Q42 1657 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 RGS12O14924 1447 aa9.31□□□□□ -0.92
HMGN1P17-201ENST00000513734 TOPAZ1Q8N9V7 1692 aa9.3□□□□□ -0.92
HMGN1P17-201ENST00000513734 A0A0G2JS52 829 aa9.3□□□□□ -0.92
HMGN1P17-201ENST00000513734 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
HMGN1P17-201ENST00000513734 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
HMGN1P17-201ENST00000513734 ITSN1Q15811 1721 aa9.3□□□□□ -0.92
HMGN1P17-201ENST00000513734 PSME1Q06323 249 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 FOXC1Q12948 553 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 ZNF697Q5TEC3 545 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 ANKMY2Q8IV38 441 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 MPNDQ8N594 471 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 FAM200AQ8TCP9 573 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 HIRIP3Q9BW71 556 aaPredicted RBP9.29□□□□□ -0.92
HMGN1P17-201ENST00000513734 ADH1CP00326 375 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 MYCP01106 439 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 DPYDQ12882 1025 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 ZNF772Q68DY9 489 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 LARGE2Q8N3Y3 721 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 PRKD2Q9BZL6 878 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 TMPRSS4Q9NRS4 437 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 KIAA1024Q9UPX6 916 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 QRICH2Q9H0J4 1663 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 PRR36Q9H6K5 1346 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 NRAPQ86VF7 1730 aa9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P17-201ENST00000513734 ZBTB7BO15156 539 aaPredicted RBP9.27□□□□□ -0.93
HMGN1P17-201ENST00000513734 SCTRP47872 440 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms