RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
CLDND1-227ENST00000513452 ABCC12Q96J65 1359 aa14.16□□□□□ -0.14
CLDND1-227ENST00000513452 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
CLDND1-227ENST00000513452 CELF2O95319 508 aaKnown RBP14.15□□□□□ -0.14
CLDND1-227ENST00000513452 BRPF1P55201 1214 aaPredicted RBP14.15□□□□□ -0.14
CLDND1-227ENST00000513452 SAPCD2Q86UD0 394 aa14.15□□□□□ -0.14
CLDND1-227ENST00000513452 PDE4DIPQ5VU43 2346 aa14.14□□□□□ -0.15
CLDND1-227ENST00000513452 SLC51AQ86UW1 340 aa14.14□□□□□ -0.15
CLDND1-227ENST00000513452 CASP8AP2Q9UKL3 1982 aa14.14□□□□□ -0.15
CLDND1-227ENST00000513452 COL3A1P02461 1466 aaPredicted RBP14.13□□□□□ -0.15
CLDND1-227ENST00000513452 NBPF26B4DH59 902 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 CC2D2BQ6DHV5 1058 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 CIAPIN1Q6FI81 312 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 NBPF10Q6P3W6 841 aaKnown RBP14.13□□□□□ -0.15
CLDND1-227ENST00000513452 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 NIM1KQ8IY84 436 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 NBPF15Q8N660 670 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 GLIS2Q9BZE0 524 aaPredicted RBP14.13□□□□□ -0.15
CLDND1-227ENST00000513452 ZNF408Q9H9D4 720 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
CLDND1-227ENST00000513452 TNRC18O15417 2968 aaPredicted RBP14.13□□□□□ -0.15
CLDND1-227ENST00000513452 RGL2O15211 777 aa14.12□□□□□ -0.15
CLDND1-227ENST00000513452 SNRPA1P09661 255 aaKnown RBP14.12□□□□□ -0.15
CLDND1-227ENST00000513452 HLFQ16534 295 aa14.12□□□□□ -0.15
CLDND1-227ENST00000513452 RPGRQ92834 1020 aaKnown RBP14.12□□□□□ -0.15
CLDND1-227ENST00000513452 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
CLDND1-227ENST00000513452 GPRC5DQ9NZD1 345 aa14.12□□□□□ -0.15
CLDND1-227ENST00000513452 TCERG1O14776 1098 aaKnown RBP14.11□□□□□ -0.15
CLDND1-227ENST00000513452 PPIP5K2O43314 1243 aa14.11□□□□□ -0.15
CLDND1-227ENST00000513452 SOX10P56693 466 aa14.11□□□□□ -0.15
CLDND1-227ENST00000513452 HHIPL1Q96JK4 782 aa14.11□□□□□ -0.15
CLDND1-227ENST00000513452 RIC1Q4ADV7 1423 aa14.1□□□□□ -0.15
CLDND1-227ENST00000513452 PPEF1O14829 653 aaPredicted RBP14.1□□□□□ -0.15
CLDND1-227ENST00000513452 AOC3Q16853 763 aa14.1□□□□□ -0.15
CLDND1-227ENST00000513452 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
CLDND1-227ENST00000513452 NYXQ9GZU5 481 aa14.1□□□□□ -0.15
CLDND1-227ENST00000513452 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
CLDND1-227ENST00000513452 GMPSP49915 693 aaPredicted RBP14.09□□□□□ -0.15
CLDND1-227ENST00000513452 GRIPAP1Q4V328 841 aa14.09□□□□□ -0.15
CLDND1-227ENST00000513452 ZIC5Q96T25 663 aa14.09□□□□□ -0.15
CLDND1-227ENST00000513452 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.16
CLDND1-227ENST00000513452 NOGQ13253 232 aa14.08□□□□□ -0.16
CLDND1-227ENST00000513452 RBM17Q96I25 401 aaKnown RBP14.08□□□□□ -0.16
CLDND1-227ENST00000513452 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
CLDND1-227ENST00000513452 PRKAR2BP31323 418 aa14.07□□□□□ -0.16
CLDND1-227ENST00000513452 CXCL9Q07325 125 aa14.07□□□□□ -0.16
CLDND1-227ENST00000513452 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
CLDND1-227ENST00000513452 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
CLDND1-227ENST00000513452 GPTP24298 496 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 HUNKP57058 714 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-227ENST00000513452 MCM10Q7L590 875 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 TRPM4Q8TD43 1214 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 ZNRF3Q9ULT6 936 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 IBTKQ9P2D0 1353 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-227ENST00000513452 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
CLDND1-227ENST00000513452 PRPF38BQ5VTL8 546 aaKnown RBP14.05□□□□□ -0.16
CLDND1-227ENST00000513452 C3orf67Q6ZVT6 689 aa14.05□□□□□ -0.16
CLDND1-227ENST00000513452 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
CLDND1-227ENST00000513452 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
CLDND1-227ENST00000513452 PGAP2Q9UHJ9 254 aa14.05□□□□□ -0.16
CLDND1-227ENST00000513452 UBN2Q6ZU65 1347 aa14.05□□□□□ -0.16
CLDND1-227ENST00000513452 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
CLDND1-227ENST00000513452 HIRAP54198 1017 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-227ENST00000513452 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
CLDND1-227ENST00000513452 CDC37L1Q7L3B6 337 aa14.04□□□□□ -0.16
CLDND1-227ENST00000513452 ZC3H15Q8WU90 426 aaKnown RBP14.04□□□□□ -0.16
CLDND1-227ENST00000513452 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
CLDND1-227ENST00000513452 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-227ENST00000513452 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
CLDND1-227ENST00000513452 SHTN1A0MZ66 631 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 ERVV-1B6SEH8 477 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 RAD17O75943 681 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 DCTN1Q14203 1278 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 DLK2Q6UY11 383 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 SAGE1Q9NXZ1 904 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
CLDND1-227ENST00000513452 NUP98P52948 1817 aa14.02□□□□□ -0.16
CLDND1-227ENST00000513452 NTSR2O95665 410 aa14.02□□□□□ -0.17
CLDND1-227ENST00000513452 TTLL7Q6ZT98 887 aa14.02□□□□□ -0.17
CLDND1-227ENST00000513452 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
CLDND1-227ENST00000513452 ZBTB3Q9H5J0 574 aa14.02□□□□□ -0.17
CLDND1-227ENST00000513452 FAM155AB1AL88 458 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-227ENST00000513452 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-227ENST00000513452 TRPA1O75762 1119 aa14.01□□□□□ -0.17
CLDND1-227ENST00000513452 TNIP1Q15025 636 aa14.01□□□□□ -0.17
CLDND1-227ENST00000513452 RGMBQ6NW40 437 aa14.01□□□□□ -0.17
CLDND1-227ENST00000513452 DPP8Q6V1X1 898 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-227ENST00000513452 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-227ENST00000513452 CNOT7Q9UIV1 285 aaKnown RBP14.01□□□□□ -0.17
CLDND1-227ENST00000513452 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
CLDND1-227ENST00000513452 ABCC4O15439 1325 aa14□□□□□ -0.17
CLDND1-227ENST00000513452 MYL6BP14649 208 aa14□□□□□ -0.17
CLDND1-227ENST00000513452 KIF23Q02241 960 aaPredicted RBP14□□□□□ -0.17
CLDND1-227ENST00000513452 KIAA2012Q0VF49 1180 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms