RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ABCB7O75027 752 aa15.82■□□□□ 0.12
PDPN-210ENST00000513143 GYS1P13807 737 aa15.82■□□□□ 0.12
PDPN-210ENST00000513143 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
PDPN-210ENST00000513143 GCKRQ14397 625 aa15.81■□□□□ 0.12
PDPN-210ENST00000513143 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
PDPN-210ENST00000513143 USP44Q9H0E7 712 aa15.81■□□□□ 0.12
PDPN-210ENST00000513143 GPTP24298 496 aa15.8■□□□□ 0.12
PDPN-210ENST00000513143 FKBP8Q14318 412 aa15.8■□□□□ 0.12
PDPN-210ENST00000513143 TBC1D9BQ66K14 1250 aa15.8■□□□□ 0.12
PDPN-210ENST00000513143 NLRP10Q86W26 655 aa15.8■□□□□ 0.12
PDPN-210ENST00000513143 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
PDPN-210ENST00000513143 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
PDPN-210ENST00000513143 UTYO14607 1347 aa15.8■□□□□ 0.12
PDPN-210ENST00000513143 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
PDPN-210ENST00000513143 PARP10Q53GL7 1025 aa15.79■□□□□ 0.12
PDPN-210ENST00000513143 MEIS3Q99687 375 aa15.79■□□□□ 0.12
PDPN-210ENST00000513143 ZBTB40Q9NUA8 1239 aa15.79■□□□□ 0.12
PDPN-210ENST00000513143 NIP7Q9Y221 180 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDPN-210ENST00000513143 COL24A1Q17RW2 1714 aa15.79■□□□□ 0.12
PDPN-210ENST00000513143 GRM8O00222 908 aa15.78■□□□□ 0.12
PDPN-210ENST00000513143 GNAI3P08754 354 aa15.78■□□□□ 0.12
PDPN-210ENST00000513143 AAMPQ13685 434 aa15.78■□□□□ 0.12
PDPN-210ENST00000513143 SETDB2Q96T68 719 aa15.78■□□□□ 0.12
PDPN-210ENST00000513143 C9orf78Q9NZ63 289 aaPredicted RBP15.78■□□□□ 0.12
PDPN-210ENST00000513143 H7C1W4 665 aa15.77■□□□□ 0.12
PDPN-210ENST00000513143 TM4SF1P30408 202 aa15.77■□□□□ 0.12
PDPN-210ENST00000513143 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
PDPN-210ENST00000513143 ERICH6BQ5W0A0 696 aa15.77■□□□□ 0.12
PDPN-210ENST00000513143 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.12
PDPN-210ENST00000513143 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
PDPN-210ENST00000513143 PCCAP05165 728 aaPredicted RBP15.76■□□□□ 0.11
PDPN-210ENST00000513143 NBPF7P0C2Y1 421 aaPredicted RBP15.76■□□□□ 0.11
PDPN-210ENST00000513143 CASP7P55210 303 aa15.76■□□□□ 0.11
PDPN-210ENST00000513143 NFIXQ14938 502 aa15.76■□□□□ 0.11
PDPN-210ENST00000513143 BICDL1Q6ZP65 573 aa15.76■□□□□ 0.11
PDPN-210ENST00000513143 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
PDPN-210ENST00000513143 SLC16A10Q8TF71 515 aa15.76■□□□□ 0.11
PDPN-210ENST00000513143 PDGFDQ9GZP0 370 aaPredicted RBP15.76■□□□□ 0.11
PDPN-210ENST00000513143 CASZ1Q86V15 1759 aa15.76■□□□□ 0.11
PDPN-210ENST00000513143 UBTFL1P0CB47 393 aaPredicted RBP15.75■□□□□ 0.11
PDPN-210ENST00000513143 POTEHQ6S545 545 aa15.75■□□□□ 0.11
PDPN-210ENST00000513143 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
PDPN-210ENST00000513143 UTP14AQ9BVJ6 771 aaKnown RBP15.75■□□□□ 0.11
PDPN-210ENST00000513143 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
PDPN-210ENST00000513143 NTSR2O95665 410 aa15.74■□□□□ 0.11
PDPN-210ENST00000513143 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
PDPN-210ENST00000513143 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
PDPN-210ENST00000513143 TRMT112Q9UI30 125 aaKnown RBP15.74■□□□□ 0.11
PDPN-210ENST00000513143 HDAC5Q9UQL6 1122 aa15.74■□□□□ 0.11
PDPN-210ENST00000513143 GNAI2P04899 355 aa15.73■□□□□ 0.11
PDPN-210ENST00000513143 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
PDPN-210ENST00000513143 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
PDPN-210ENST00000513143 NYXQ9GZU5 481 aa15.73■□□□□ 0.11
PDPN-210ENST00000513143 CDHR2Q9BYE9 1310 aa15.73■□□□□ 0.11
PDPN-210ENST00000513143 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
PDPN-210ENST00000513143 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
PDPN-210ENST00000513143 DDR1Q08345 913 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 TPTE2Q6XPS3 522 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 KAZALD1Q96I82 304 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 MYH3P11055 1940 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 SH3TC1Q8TE82 1336 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 LAMB2P55268 1798 aa15.72■□□□□ 0.11
PDPN-210ENST00000513143 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.11
PDPN-210ENST00000513143 MSL1Q68DK7 614 aa15.71■□□□□ 0.11
PDPN-210ENST00000513143 NBPF5PQ86XG9 351 aaPredicted RBP15.71■□□□□ 0.11
PDPN-210ENST00000513143 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
PDPN-210ENST00000513143 PLA2G12BQ9BX93 195 aa15.71■□□□□ 0.11
PDPN-210ENST00000513143 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
PDPN-210ENST00000513143 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.11
PDPN-210ENST00000513143 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.11
PDPN-210ENST00000513143 SERPINB2P05120 415 aa15.7■□□□□ 0.1
PDPN-210ENST00000513143 MMP10P09238 476 aa15.7■□□□□ 0.1
PDPN-210ENST00000513143 PCDHB15Q9Y5E8 787 aa15.7■□□□□ 0.1
PDPN-210ENST00000513143 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
PDPN-210ENST00000513143 SOCS7O14512 581 aa15.69■□□□□ 0.1
PDPN-210ENST00000513143 IRS4O14654 1257 aaPredicted RBP15.69■□□□□ 0.1
PDPN-210ENST00000513143 FOXO4P98177 505 aa15.69■□□□□ 0.1
PDPN-210ENST00000513143 ERFEQ4G0M1 354 aa15.69■□□□□ 0.1
PDPN-210ENST00000513143 SLC10A5Q5PT55 438 aa15.69■□□□□ 0.1
PDPN-210ENST00000513143 NUTM1Q86Y26 1132 aa15.69■□□□□ 0.1
PDPN-210ENST00000513143 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
PDPN-210ENST00000513143 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
PDPN-210ENST00000513143 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 PRR5LQ6MZQ0 368 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 CEP85Q6P2H3 762 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 RPAP2Q8IXW5 612 aaPredicted RBP15.68■□□□□ 0.1
PDPN-210ENST00000513143 CNBD1Q8NA66 436 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 MTFR1LQ9H019 292 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
PDPN-210ENST00000513143 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 PARP3Q9Y6F1 533 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 ABCC12Q96J65 1359 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 PDE8AO60658 829 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 MTX1Q13505 466 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
PDPN-210ENST00000513143 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
PDPN-210ENST00000513143 RIC1Q4ADV7 1423 aa15.67■□□□□ 0.1
PDPN-210ENST00000513143 ZBTB7AO95365 584 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms