RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 ZNF330Q9Y3S2 320 aaPredicted RBP11.73□□□□□ -0.53
DHFR-206ENST00000513048 UBR3Q6ZT12 1888 aa11.72□□□□□ -0.53
DHFR-206ENST00000513048 H7C1W4 665 aa11.72□□□□□ -0.53
DHFR-206ENST00000513048 PLSCR1O15162 318 aa11.72□□□□□ -0.53
DHFR-206ENST00000513048 CCDC191Q8NCU4 936 aa11.72□□□□□ -0.53
DHFR-206ENST00000513048 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
DHFR-206ENST00000513048 RGL2O15211 777 aa11.71□□□□□ -0.53
DHFR-206ENST00000513048 MTX1Q13505 466 aa11.71□□□□□ -0.53
DHFR-206ENST00000513048 TXNRD1Q16881 649 aa11.71□□□□□ -0.53
DHFR-206ENST00000513048 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
DHFR-206ENST00000513048 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
DHFR-206ENST00000513048 DCTPP1Q9H773 170 aa11.71□□□□□ -0.53
DHFR-206ENST00000513048 CWC25Q9NXE8 425 aaPredicted RBP11.71□□□□□ -0.53
DHFR-206ENST00000513048 C9orf78Q9NZ63 289 aaPredicted RBP11.71□□□□□ -0.53
DHFR-206ENST00000513048 C4AP0C0L4 1744 aa11.71□□□□□ -0.54
DHFR-206ENST00000513048 A0A087WZG4 1122 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 PNMA6EA0A0J9YXQ4 647 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
DHFR-206ENST00000513048 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 EPHA10Q5JZY3 1008 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 SSH3Q8TE77 659 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 PDZRN3Q9UPQ7 1066 aa11.7□□□□□ -0.54
DHFR-206ENST00000513048 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 GNPATO15228 680 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 APBA3O96018 575 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 PPP1R42Q7Z4L9 355 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
DHFR-206ENST00000513048 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
DHFR-206ENST00000513048 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
DHFR-206ENST00000513048 FOXO4P98177 505 aa11.68□□□□□ -0.54
DHFR-206ENST00000513048 NUCB1Q02818 461 aa11.68□□□□□ -0.54
DHFR-206ENST00000513048 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
DHFR-206ENST00000513048 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
DHFR-206ENST00000513048 BICC1Q9H694 974 aaKnown RBP11.68□□□□□ -0.54
DHFR-206ENST00000513048 NARFQ9UHQ1 456 aa11.68□□□□□ -0.54
DHFR-206ENST00000513048 HDAC5Q9UQL6 1122 aa11.68□□□□□ -0.54
DHFR-206ENST00000513048 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
DHFR-206ENST00000513048 COL24A1Q17RW2 1714 aa11.67□□□□□ -0.54
DHFR-206ENST00000513048 HMMRO75330 724 aa11.67□□□□□ -0.54
DHFR-206ENST00000513048 GPTP24298 496 aa11.67□□□□□ -0.54
DHFR-206ENST00000513048 CLEC4GQ6UXB4 293 aa11.67□□□□□ -0.54
DHFR-206ENST00000513048 NPM2Q86SE8 214 aaKnown RBP11.67□□□□□ -0.54
DHFR-206ENST00000513048 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
DHFR-206ENST00000513048 ARXQ96QS3 562 aa11.67□□□□□ -0.54
DHFR-206ENST00000513048 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
DHFR-206ENST00000513048 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
DHFR-206ENST00000513048 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
DHFR-206ENST00000513048 PDE4AP27815 886 aa11.66□□□□□ -0.54
DHFR-206ENST00000513048 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
DHFR-206ENST00000513048 AK7Q96M32 723 aa11.66□□□□□ -0.54
DHFR-206ENST00000513048 CAMKK2Q96RR4 588 aa11.66□□□□□ -0.54
DHFR-206ENST00000513048 PLA2G12BQ9BX93 195 aa11.66□□□□□ -0.54
DHFR-206ENST00000513048 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
DHFR-206ENST00000513048 SRGAP3O43295 1099 aa11.65□□□□□ -0.54
DHFR-206ENST00000513048 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
DHFR-206ENST00000513048 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
DHFR-206ENST00000513048 SUSD4Q5VX71 490 aa11.65□□□□□ -0.54
DHFR-206ENST00000513048 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
DHFR-206ENST00000513048 SYNE4Q8N205 404 aa11.65□□□□□ -0.54
DHFR-206ENST00000513048 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
DHFR-206ENST00000513048 LAMB2P55268 1798 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 EP400Q96L91 3159 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
DHFR-206ENST00000513048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
DHFR-206ENST00000513048 NTSR2O95665 410 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
DHFR-206ENST00000513048 SSFA2P28290 1259 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
DHFR-206ENST00000513048 MYH3P11055 1940 aa11.63□□□□□ -0.55
DHFR-206ENST00000513048 CSF1RP07333 972 aa11.63□□□□□ -0.55
DHFR-206ENST00000513048 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
DHFR-206ENST00000513048 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
DHFR-206ENST00000513048 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
DHFR-206ENST00000513048 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■■□□□ 13.5
DHFR-206ENST00000513048 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
DHFR-206ENST00000513048 PHF14O94880 888 aa11.62□□□□□ -0.55
DHFR-206ENST00000513048 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.55
DHFR-206ENST00000513048 EZH2Q15910 746 aaKnown RBP11.62□□□□□ -0.55
DHFR-206ENST00000513048 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
DHFR-206ENST00000513048 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
DHFR-206ENST00000513048 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
DHFR-206ENST00000513048 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
DHFR-206ENST00000513048 COPRSQ9NQ92 184 aa11.62□□□□□ -0.55
DHFR-206ENST00000513048 TRMT112Q9UI30 125 aaKnown RBP11.62□□□□□ -0.55
DHFR-206ENST00000513048 QSER1Q2KHR3 1735 aa11.61□□□□□ -0.55
DHFR-206ENST00000513048 IRS4O14654 1257 aaPredicted RBP11.61□□□□□ -0.55
DHFR-206ENST00000513048 SMARCA5O60264 1052 aaPredicted RBP11.61□□□□□ -0.55
DHFR-206ENST00000513048 RAB11FIP3O75154 756 aa11.61□□□□□ -0.55
DHFR-206ENST00000513048 ZPR1O75312 459 aa11.61□□□□□ -0.55
DHFR-206ENST00000513048 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
DHFR-206ENST00000513048 GYS1P13807 737 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms