RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 TRIM66O15016 1216 aa16.99■□□□□ 0.31
SDHA-215ENST00000512962 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
SDHA-215ENST00000512962 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
SDHA-215ENST00000512962 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
SDHA-215ENST00000512962 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
SDHA-215ENST00000512962 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
SDHA-215ENST00000512962 COL15A1P39059 1388 aa16.96■□□□□ 0.31
SDHA-215ENST00000512962 SLX4Q8IY92 1834 aa16.96■□□□□ 0.3
SDHA-215ENST00000512962 ARFGEF2Q9Y6D5 1785 aa16.95■□□□□ 0.3
SDHA-215ENST00000512962 MRC1P22897 1456 aa16.95■□□□□ 0.3
SDHA-215ENST00000512962 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
SDHA-215ENST00000512962 HSP90AB1P08238 724 aaKnown RBP16.95■□□□□ 0.3
SDHA-215ENST00000512962 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
SDHA-215ENST00000512962 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
SDHA-215ENST00000512962 SERPINB2P05120 415 aa16.94■□□□□ 0.3
SDHA-215ENST00000512962 MTHFSP49914 203 aa16.94■□□□□ 0.3
SDHA-215ENST00000512962 PDE4DQ08499 809 aa16.94■□□□□ 0.3
SDHA-215ENST00000512962 PLEKHO1Q53GL0 409 aaPredicted RBP16.94■□□□□ 0.3
SDHA-215ENST00000512962 TTLL6Q8N841 843 aa16.94■□□□□ 0.3
SDHA-215ENST00000512962 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
SDHA-215ENST00000512962 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
SDHA-215ENST00000512962 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
SDHA-215ENST00000512962 NARFQ9UHQ1 456 aa16.93■□□□□ 0.3
SDHA-215ENST00000512962 ZPR1O75312 459 aa16.92■□□□□ 0.3
SDHA-215ENST00000512962 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
SDHA-215ENST00000512962 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
SDHA-215ENST00000512962 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
SDHA-215ENST00000512962 DDNO94850 711 aaPredicted RBP16.91■□□□□ 0.3
SDHA-215ENST00000512962 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
SDHA-215ENST00000512962 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
SDHA-215ENST00000512962 KDM4CQ9H3R0 1056 aa16.91■□□□□ 0.3
SDHA-215ENST00000512962 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
SDHA-215ENST00000512962 SCN4AP35499 1836 aa16.91■□□□□ 0.3
SDHA-215ENST00000512962 C21orf2O43822 256 aa16.9■□□□□ 0.3
SDHA-215ENST00000512962 VEGFBP49765 207 aa16.9■□□□□ 0.3
SDHA-215ENST00000512962 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
SDHA-215ENST00000512962 ERFEQ4G0M1 354 aa16.89■□□□□ 0.29
SDHA-215ENST00000512962 AMOTQ4VCS5 1084 aa16.89■□□□□ 0.29
SDHA-215ENST00000512962 BICDL1Q6ZP65 573 aa16.89■□□□□ 0.29
SDHA-215ENST00000512962 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
SDHA-215ENST00000512962 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
SDHA-215ENST00000512962 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.89■□□□□ 0.29
SDHA-215ENST00000512962 LBX1P52954 281 aa16.88■□□□□ 0.29
SDHA-215ENST00000512962 HIC1Q14526 733 aa16.88■□□□□ 0.29
SDHA-215ENST00000512962 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
SDHA-215ENST00000512962 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
SDHA-215ENST00000512962 THSD7BQ9C0I4 1608 aa16.88■□□□□ 0.29
SDHA-215ENST00000512962 BCORQ6W2J9 1755 aa16.87■□□□□ 0.29
SDHA-215ENST00000512962 H0YIN7 160 aa16.87■□□□□ 0.29
SDHA-215ENST00000512962 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
SDHA-215ENST00000512962 IRF6O14896 467 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 ITGBL1O95965 494 aaPredicted RBP16.86■□□□□ 0.29
SDHA-215ENST00000512962 FECHP22830 423 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
SDHA-215ENST00000512962 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 ZNF622Q969S3 477 aaKnown RBP eCLIP16.86■□□□□ 0.29
SDHA-215ENST00000512962 ABHD8Q96I13 439 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 WBP1LQ9NX94 342 aa16.86■□□□□ 0.29
SDHA-215ENST00000512962 HSPA8P11142 646 aaKnown RBP16.85■□□□□ 0.29
SDHA-215ENST00000512962 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
SDHA-215ENST00000512962 PRR5LQ6MZQ0 368 aa16.84■□□□□ 0.29
SDHA-215ENST00000512962 LTBP3Q9NS15 1303 aa16.84■□□□□ 0.29
SDHA-215ENST00000512962 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
SDHA-215ENST00000512962 PTGDRQ13258 359 aa16.83■□□□□ 0.28
SDHA-215ENST00000512962 LTBP1Q14766 1721 aa16.83■□□□□ 0.28
SDHA-215ENST00000512962 ZNF541Q9H0D2 1346 aa16.83■□□□□ 0.28
SDHA-215ENST00000512962 TAOK3Q9H2K8 898 aa16.83■□□□□ 0.28
SDHA-215ENST00000512962 TAF1DQ9H5J8 278 aaPredicted RBP16.83■□□□□ 0.28
SDHA-215ENST00000512962 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
SDHA-215ENST00000512962 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
SDHA-215ENST00000512962 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
SDHA-215ENST00000512962 IL27Q8NEV9 243 aa16.81■□□□□ 0.28
SDHA-215ENST00000512962 TMEM88BA6NKF7 163 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 IL13P35225 146 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 PRPF40BQ6NWY9 871 aaKnown RBP16.8■□□□□ 0.28
SDHA-215ENST00000512962 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 BRIP1Q9BX63 1249 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 PCDHGA4Q9Y5G9 962 aa16.8■□□□□ 0.28
SDHA-215ENST00000512962 COL4A5P29400 1685 aa16.79■□□□□ 0.28
SDHA-215ENST00000512962 OLFM4Q6UX06 510 aa16.79■□□□□ 0.28
SDHA-215ENST00000512962 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.282e-7■■□□□ 11.6
SDHA-215ENST00000512962 EPAS1Q99814 870 aa16.78■□□□□ 0.28
SDHA-215ENST00000512962 CDHR5Q9HBB8 845 aa16.78■□□□□ 0.28
SDHA-215ENST00000512962 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
SDHA-215ENST00000512962 RASSF10A6NK89 507 aa16.77■□□□□ 0.28
SDHA-215ENST00000512962 PDE6BP35913 854 aa16.77■□□□□ 0.28
SDHA-215ENST00000512962 AMHR2Q16671 573 aa16.77■□□□□ 0.28
SDHA-215ENST00000512962 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
SDHA-215ENST00000512962 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.28
SDHA-215ENST00000512962 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
SDHA-215ENST00000512962 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.27
SDHA-215ENST00000512962 SRGNP10124 158 aa16.76■□□□□ 0.27
SDHA-215ENST00000512962 C7orf43Q8WVR3 580 aa16.76■□□□□ 0.27
SDHA-215ENST00000512962 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
SDHA-215ENST00000512962 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
SDHA-215ENST00000512962 HMOX1P09601 288 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms