RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 AVENQ9NQS1 362 aaPredicted RBP5.07□□□□□ -1.6
PDGFC-208ENST00000512711 KLK14Q9P0G3 267 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 ANKIB1Q9P2G1 1089 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 DMGDHQ9UI17 866 aaKnown RBP5.07□□□□□ -1.6
PDGFC-208ENST00000512711 KCNH4Q9UQ05 1017 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 ELOA3CA0A087WX78 387 aaPredicted RBP5.06□□□□□ -1.6
PDGFC-208ENST00000512711 ELOA3DA6NLF2 546 aaPredicted RBP5.06□□□□□ -1.6
PDGFC-208ENST00000512711 GRNP28799 593 aaKnown RBP5.06□□□□□ -1.6
PDGFC-208ENST00000512711 WEE1P30291 646 aa5.06□□□□□ -1.6
PDGFC-208ENST00000512711 COL9A3Q14050 684 aaPredicted RBP5.06□□□□□ -1.6
PDGFC-208ENST00000512711 ELOA3BQ3SY89 546 aa5.06□□□□□ -1.6
PDGFC-208ENST00000512711 ELOA3Q8NG57 546 aa5.06□□□□□ -1.6
PDGFC-208ENST00000512711 CHMP3Q9Y3E7 222 aa5.06□□□□□ -1.6
PDGFC-208ENST00000512711 GPC6Q9Y625 555 aaPredicted RBP5.06□□□□□ -1.6
PDGFC-208ENST00000512711 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 C1QTNF9BB2RNN3 333 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 GNB5O14775 395 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 SIN3BO75182 1162 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 IGFBP4P22692 258 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 KCNQ4P56696 695 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 ALYREFQ86V81 257 aaKnown RBP5.05□□□□□ -1.6
PDGFC-208ENST00000512711 FAM200AQ8TCP9 573 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 BHMTQ93088 406 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 PRIMPOLQ96LW4 560 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 PLVAPQ9BX97 442 aa5.05□□□□□ -1.6
PDGFC-208ENST00000512711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.04□□□□□ -1.6
PDGFC-208ENST00000512711 ADARB2-AS1A8MUL3 147 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 FAM69CQ0P6D2 419 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 RTN1Q16799 776 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 CAPN12Q6ZSI9 719 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 CD163Q86VB7 1156 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 GSX2Q9BZM3 304 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 ZMYND15Q9H091 742 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 IGFLR1Q9H665 355 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 QTRT2Q9H974 415 aaKnown RBP5.04□□□□□ -1.6
PDGFC-208ENST00000512711 LRFN2Q9ULH4 789 aa5.04□□□□□ -1.6
PDGFC-208ENST00000512711 OPLAHO14841 1288 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 ALBP02768 609 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 ALAS2P22557 587 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 ITGB7P26010 798 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 CHRNA4P43681 627 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 MICALL1Q8N3F8 863 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 TNFRSF25Q93038 417 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 ZMIZ1Q9ULJ6 1067 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 NOVA2Q9UNW9 492 aaKnown RBP5.03□□□□□ -1.6
PDGFC-208ENST00000512711 USP20Q9Y2K6 914 aa5.03□□□□□ -1.6
PDGFC-208ENST00000512711 FAM229AH3BQW9 127 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 M0R082 166 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 INPP5BP32019 993 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 ADH7P40394 386 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 FKBP5Q13451 457 aaPredicted RBP5.02□□□□□ -1.61
PDGFC-208ENST00000512711 DGKZQ13574 1117 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 FAM26DQ5JW98 314 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 C20orf204Q6ZNR8 217 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 ZNF417Q8TAU3 575 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 STK32AQ8WU08 396 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 ZNF587Q96SQ5 575 aaPredicted RBP5.02□□□□□ -1.61
PDGFC-208ENST00000512711 SAP130Q9H0E3 1048 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 ZFATQ9P243 1243 aa5.02□□□□□ -1.61
PDGFC-208ENST00000512711 ARID3CA6NKF2 412 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 TGFBR3LH3BV60 316 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 PRMT3O60678 531 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 MICAL2O94851 1124 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 TARSP26639 723 aaKnown RBP5.01□□□□□ -1.61
PDGFC-208ENST00000512711 TBC1D8BQ0IIM8 1120 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 OCLNQ16625 522 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 COX20Q5RI15 118 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 SLAIN2Q9P270 581 aa5.01□□□□□ -1.61
PDGFC-208ENST00000512711 ZBTB42B2RXF5 422 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 SASH3O75995 380 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 IDH3AP50213 366 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 DOC2BQ14184 412 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 C11orf91Q3C1V1 193 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 IER5Q5VY09 327 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 KRT25Q7Z3Z0 450 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 NUDT8Q8WV74 236 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 IFT43Q96FT9 208 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 SEMA6BQ9H3T3 888 aa5□□□□□ -1.61
PDGFC-208ENST00000512711 GTF3C5Q9Y5Q8 519 aaPredicted RBP5□□□□□ -1.61
PDGFC-208ENST00000512711 FOXO3O43524 673 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 NID1P14543 1247 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 NFKB1P19838 968 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 PLAURQ03405 335 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 CCINQ13939 588 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 NAA30Q147X3 362 aaPredicted RBP4.99□□□□□ -1.61
PDGFC-208ENST00000512711 MYO19Q96H55 970 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 UBE2OQ9C0C9 1292 aaKnown RBP4.99□□□□□ -1.61
PDGFC-208ENST00000512711 DNAJB12Q9NXW2 375 aaKnown RBP4.99□□□□□ -1.61
PDGFC-208ENST00000512711 GTF3C3Q9Y5Q9 886 aa4.99□□□□□ -1.61
PDGFC-208ENST00000512711 ACIN1Q9UKV3 1341 aaKnown RBP4.98□□□□□ -1.61
PDGFC-208ENST00000512711 NEUROD1Q13562 356 aa4.98□□□□□ -1.61
PDGFC-208ENST00000512711 ELOAQ14241 798 aaKnown RBP4.98□□□□□ -1.61
PDGFC-208ENST00000512711 GRIK4Q16099 956 aa4.98□□□□□ -1.61
PDGFC-208ENST00000512711 TMEM164Q5U3C3 297 aa4.98□□□□□ -1.61
PDGFC-208ENST00000512711 PRDM6Q9NQX0 595 aa4.98□□□□□ -1.61
PDGFC-208ENST00000512711 NOP53Q9NZM5 478 aaKnown RBP4.98□□□□□ -1.61
PDGFC-208ENST00000512711 NAGPAQ9UK23 515 aa4.98□□□□□ -1.61
PDGFC-208ENST00000512711 SLC6A14Q9UN76 642 aa4.98□□□□□ -1.61
PDGFC-208ENST00000512711 PIK3R2O00459 728 aa4.97□□□□□ -1.61
PDGFC-208ENST00000512711 ATG7O95352 703 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms