RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
PDCD6-209ENST00000512466 ME1P48163 572 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 ANO6Q4KMQ2 910 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 DNAJC25Q9H1X3 360 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 LRMPQ12912 555 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 CHST3Q7LGC8 479 aa12.62□□□□□ -0.39
PDCD6-209ENST00000512466 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 LETM1O95202 739 aaPredicted RBP12.61□□□□□ -0.39
PDCD6-209ENST00000512466 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 SOS1Q07889 1333 aaPredicted RBP12.61□□□□□ -0.39
PDCD6-209ENST00000512466 PSMA5P28066 241 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 ECHDC1Q9NTX5 307 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 BIN1O00499 593 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 SMC2O95347 1197 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 TNNT1P13805 278 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 CCDC73Q6ZRK6 1079 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 RUFY3Q7L099 469 aa12.61□□□□□ -0.39
PDCD6-209ENST00000512466 HTATSF1O43719 755 aaKnown RBP12.6□□□□□ -0.39
PDCD6-209ENST00000512466 ZNF165P49910 485 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 USP6P35125 1406 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 PTCD1O75127 700 aaKnown RBP12.6□□□□□ -0.39
PDCD6-209ENST00000512466 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDCD6-209ENST00000512466 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 CCDC112Q8NEF3 446 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 ZNF500O60304 480 aaPredicted RBP12.6□□□□□ -0.39
PDCD6-209ENST00000512466 ATP2B1P20020 1258 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 SMAP1Q8IYB5 467 aaPredicted RBP12.6□□□□□ -0.39
PDCD6-209ENST00000512466 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
PDCD6-209ENST00000512466 ZNF142P52746 1687 aaPredicted RBP12.6□□□□□ -0.39
PDCD6-209ENST00000512466 SGSM2O43147 1006 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 TMX1Q9H3N1 280 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 LIG1P18858 919 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 PDCP20941 246 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 MCM5P33992 734 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 EVA1CP58658 441 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 ANAPC15P60006 121 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 DDX46Q7L014 1031 aaKnown RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 INTS4Q96HW7 963 aaKnown RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 CYP2E1P05181 493 aaPredicted RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
PDCD6-209ENST00000512466 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
PDCD6-209ENST00000512466 KINO60870 393 aaKnown RBP12.58□□□□□ -0.39
PDCD6-209ENST00000512466 APPP05067 770 aa12.58□□□□□ -0.39
PDCD6-209ENST00000512466 CABLES1Q8TDN4 633 aa12.58□□□□□ -0.39
PDCD6-209ENST00000512466 NRBP1Q9UHY1 535 aa12.58□□□□□ -0.39
PDCD6-209ENST00000512466 GCP02774 474 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 HSPA4P34932 840 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 HSP90AA4PQ58FG1 418 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
PDCD6-209ENST00000512466 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 NRDCO43847 1150 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
PDCD6-209ENST00000512466 TYRO3Q06418 890 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 ME3Q16798 604 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
PDCD6-209ENST00000512466 CPSF1Q10570 1443 aaKnown RBP12.58□□□□□ -0.4
PDCD6-209ENST00000512466 CPLX1O14810 134 aa12.57□□□□□ -0.4
PDCD6-209ENST00000512466 BRF1Q92994 677 aa12.57□□□□□ -0.4
PDCD6-209ENST00000512466 JAK2O60674 1132 aa12.57□□□□□ -0.4
PDCD6-209ENST00000512466 MYD88Q99836 296 aa12.57□□□□□ -0.4
PDCD6-209ENST00000512466 PDIA4P13667 645 aaKnown RBP12.57□□□□□ -0.4
PDCD6-209ENST00000512466 CCDC94Q9BW85 323 aaPredicted RBP12.57□□□□□ -0.4
PDCD6-209ENST00000512466 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.57□□□□□ -0.4
PDCD6-209ENST00000512466 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
PDCD6-209ENST00000512466 HAND2P61296 217 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDCD6-209ENST00000512466 CREB3L3Q68CJ9 461 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 BRINP3Q76B58 766 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
PDCD6-209ENST00000512466 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 LRRC7Q96NW7 1537 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 C1orf167Q5SNV9 1468 aa12.56□□□□□ -0.4
PDCD6-209ENST00000512466 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
PDCD6-209ENST00000512466 PDLIM2Q96JY6 352 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
PDCD6-209ENST00000512466 TTC6Q86TZ1 520 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 NCOA3Q9Y6Q9 1424 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 RAD50Q92878 1312 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
PDCD6-209ENST00000512466 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
PDCD6-209ENST00000512466 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
PDCD6-209ENST00000512466 MYRIPQ8NFW9 859 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 FAM200AQ8TCP9 573 aa12.55□□□□□ -0.4
PDCD6-209ENST00000512466 TPCN1Q9ULQ1 816 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms