RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 TMEM94Q12767 1356 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 PHF14O94880 888 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-210ENST00000512332 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 TTC5Q8N0Z6 440 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-210ENST00000512332 PDRG1Q9NUG6 133 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
CPNE4-210ENST00000512332 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 CYP27B1O15528 508 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 STX6O43752 255 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 PSMA5P28066 241 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-210ENST00000512332 PRPF40BQ6NWY9 871 aaKnown RBP11.09□□□□□ -0.63
CPNE4-210ENST00000512332 FOXD4L4Q8WXT5 416 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-210ENST00000512332 CHAMP1Q96JM3 812 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 SMC3Q9UQE7 1217 aa11.09□□□□□ -0.63
CPNE4-210ENST00000512332 JCADQ9P266 1359 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 SYCE3A1L190 88 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 SYT1P21579 422 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 RFX5P48382 616 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-210ENST00000512332 ZSCAN30Q86W11 494 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 TICAM2Q86XR7 235 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
CPNE4-210ENST00000512332 MYD88Q99836 296 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 USP16Q9Y5T5 823 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-210ENST00000512332 RFX7Q2KHR2 1363 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 MYL6BP14649 208 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 ATP5JP18859 108 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 ADCK5Q3MIX3 580 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 RNF20Q5VTR2 975 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 CREB3L3Q68CJ9 461 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
CPNE4-210ENST00000512332 CCDC8Q9H0W5 538 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-210ENST00000512332 RBM8AQ9Y5S9 174 aaKnown RBP11.08□□□□□ -0.64
CPNE4-210ENST00000512332 MED23Q9ULK4 1368 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 LETM1O95202 739 aaPredicted RBP11.07□□□□□ -0.64
CPNE4-210ENST00000512332 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
CPNE4-210ENST00000512332 EPHA10Q5JZY3 1008 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 PLBD2Q8NHP8 589 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 HMG20BQ9P0W2 317 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 F13A1P00488 732 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
CPNE4-210ENST00000512332 ANKRD1Q15327 319 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
CPNE4-210ENST00000512332 PARP4Q9UKK3 1724 aaKnown RBP11.06□□□□□ -0.64
CPNE4-210ENST00000512332 CABP4P57796 275 aa11.06□□□□□ -0.64
CPNE4-210ENST00000512332 UBE2HP62256 183 aa11.06□□□□□ -0.64
CPNE4-210ENST00000512332 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
CPNE4-210ENST00000512332 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
CPNE4-210ENST00000512332 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
CPNE4-210ENST00000512332 BOLA2Q9H3K6 86 aa11.06□□□□□ -0.64
CPNE4-210ENST00000512332 TLR7Q9NYK1 1049 aaKnown RBP11.06□□□□□ -0.64
CPNE4-210ENST00000512332 SLC27A2O14975 620 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 CASP7P55210 303 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 SIL1Q9H173 461 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 TSPY26PQ9H489 355 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 A0A0D9SFI3 127 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 LARGE1O95461 756 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 CPA1P15085 419 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 GJB2P29033 226 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 TNNI3KQ59H18 835 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 NOL7Q9UMY1 257 aaKnown RBP11.05□□□□□ -0.64
CPNE4-210ENST00000512332 FPGT-TNNI3KV9GXZ4 949 aa11.05□□□□□ -0.64
CPNE4-210ENST00000512332 GADD45BO75293 160 aaPredicted RBP11.04□□□□□ -0.64
CPNE4-210ENST00000512332 TAF5LO75529 589 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 MCM5P33992 734 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 KCNJ4P48050 445 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 KRT32Q14532 448 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 ME3Q16798 604 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 DBNLQ9UJU6 430 aaKnown RBP11.04□□□□□ -0.64
CPNE4-210ENST00000512332 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 ERVV-2B6SEH9 535 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 H7C1W4 665 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 PDCP20941 246 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 UVSSAQ2YD98 709 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 CCDC183Q5T5S1 534 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 CCDC83Q8IWF9 413 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 DDX17Q92841 729 aaKnown RBP11.04□□□□□ -0.64
CPNE4-210ENST00000512332 GLI3P10071 1580 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
CPNE4-210ENST00000512332 TCHHQ07283 1943 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 A0A087WZG4 1122 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 ST3GAL1Q11201 340 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-210ENST00000512332 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 UBE3BQ7Z3V4 1068 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 CABLES1Q8TDN4 633 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 HAUS7Q99871 368 aa11.03□□□□□ -0.64
CPNE4-210ENST00000512332 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms