RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 NPR1P16066 1061 aa13.77□□□□□ -0.21
PDLIM5-217ENST00000512274 SCNN1DP51172 638 aa13.77□□□□□ -0.21
PDLIM5-217ENST00000512274 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
PDLIM5-217ENST00000512274 COL4A5P29400 1685 aa13.76□□□□□ -0.21
PDLIM5-217ENST00000512274 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
PDLIM5-217ENST00000512274 WDR43Q15061 677 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDLIM5-217ENST00000512274 NPM2Q86SE8 214 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-217ENST00000512274 NBPF5PQ86XG9 351 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-217ENST00000512274 CAMTA2O94983 1202 aa13.75□□□□□ -0.21
PDLIM5-217ENST00000512274 A1BGP04217 495 aa13.75□□□□□ -0.21
PDLIM5-217ENST00000512274 USP50Q70EL3 339 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-217ENST00000512274 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
PDLIM5-217ENST00000512274 GLIS2Q9BZE0 524 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-217ENST00000512274 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
PDLIM5-217ENST00000512274 MRC1P22897 1456 aa13.74□□□□□ -0.21
PDLIM5-217ENST00000512274 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
PDLIM5-217ENST00000512274 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-217ENST00000512274 PIP4K2AP48426 406 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-217ENST00000512274 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-217ENST00000512274 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-217ENST00000512274 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 TRPA1O75762 1119 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 NOGQ13253 232 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 LARGE2Q8N3Y3 721 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 PSMD1Q99460 953 aa13.71□□□□□ -0.21
PDLIM5-217ENST00000512274 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.22
PDLIM5-217ENST00000512274 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
PDLIM5-217ENST00000512274 HMOX1P09601 288 aa13.7□□□□□ -0.22
PDLIM5-217ENST00000512274 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
PDLIM5-217ENST00000512274 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
PDLIM5-217ENST00000512274 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-217ENST00000512274 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
PDLIM5-217ENST00000512274 KLRG2A4D1S0 409 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 IL13P35225 146 aa13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 HUNKP57058 714 aa13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 MTHFSDQ2M296 383 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 DLK2Q6UY11 383 aa13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 GCC1Q96CN9 775 aa13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 GPRC5DQ9NZD1 345 aa13.69□□□□□ -0.22
PDLIM5-217ENST00000512274 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
PDLIM5-217ENST00000512274 NIM1KQ8IY84 436 aa13.68□□□□□ -0.22
PDLIM5-217ENST00000512274 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-217ENST00000512274 RNF186Q9NXI6 227 aa13.68□□□□□ -0.22
PDLIM5-217ENST00000512274 SNED1Q8TER0 1413 aa13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 ZNF790Q6PG37 636 aa13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 CTU1Q7Z7A3 348 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDLIM5-217ENST00000512274 FAM155AB1AL88 458 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-217ENST00000512274 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-217ENST00000512274 USP48Q86UV5 1035 aa13.66□□□□□ -0.22
PDLIM5-217ENST00000512274 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
PDLIM5-217ENST00000512274 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 GMPSP49915 693 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 TEFQ10587 303 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 AOC3Q16853 763 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 RGMBQ6NW40 437 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 CDC37L1Q7L3B6 337 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 SAGE1Q9NXZ1 904 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 ZNF652Q9Y2D9 606 aa13.65□□□□□ -0.22
PDLIM5-217ENST00000512274 POLR2AP24928 1970 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 KCNQ3O43525 872 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 CXCL9Q07325 125 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 PGAP2Q9UHJ9 254 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
PDLIM5-217ENST00000512274 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 ZNF157P51786 506 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 CC2D2BQ6DHV5 1058 aa13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
PDLIM5-217ENST00000512274 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-217ENST00000512274 SIPA1L3O60292 1781 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-217ENST00000512274 HLFQ16534 295 aa13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 IL17REQ8NFR9 667 aa13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 CCDC102AQ96A19 550 aa13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 GBA2Q9HCG7 927 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 HDAC9Q9UKV0 1011 aa13.61□□□□□ -0.23
PDLIM5-217ENST00000512274 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 PPEF1O14829 653 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 RAD17O75943 681 aa13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 ERICH6BQ5W0A0 696 aa13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms