RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
SUB1-210ENST00000511988 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
SUB1-210ENST00000511988 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
SUB1-210ENST00000511988 SSFA2P28290 1259 aa12.85□□□□□ -0.35
SUB1-210ENST00000511988 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
SUB1-210ENST00000511988 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
SUB1-210ENST00000511988 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
SUB1-210ENST00000511988 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
SUB1-210ENST00000511988 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
SUB1-210ENST00000511988 ALDH1L1O75891 902 aa12.84□□□□□ -0.35
SUB1-210ENST00000511988 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
SUB1-210ENST00000511988 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
SUB1-210ENST00000511988 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
SUB1-210ENST00000511988 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
SUB1-210ENST00000511988 EXOC6Q8TAG9 804 aa12.83□□□□□ -0.36
SUB1-210ENST00000511988 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
SUB1-210ENST00000511988 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
SUB1-210ENST00000511988 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
SUB1-210ENST00000511988 GTF3C3Q9Y5Q9 886 aa12.82□□□□□ -0.36
SUB1-210ENST00000511988 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
SUB1-210ENST00000511988 LAMB2P55268 1798 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 GNAI3P08754 354 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 MYD88Q99836 296 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
SUB1-210ENST00000511988 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
SUB1-210ENST00000511988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
SUB1-210ENST00000511988 NEURL1BA8MQ27 555 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
SUB1-210ENST00000511988 TCIRG1Q13488 830 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 CCDC191Q8NCU4 936 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 ISCA1Q9BUE6 129 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
SUB1-210ENST00000511988 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
SUB1-210ENST00000511988 ZPR1O75312 459 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 PHF14O94880 888 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 RFC4P35249 363 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
SUB1-210ENST00000511988 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
SUB1-210ENST00000511988 MEIS3Q99687 375 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
SUB1-210ENST00000511988 TFCP2L1Q9NZI6 479 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 UTYO14607 1347 aa12.79□□□□□ -0.36
SUB1-210ENST00000511988 GRM8O00222 908 aa12.78□□□□□ -0.36
SUB1-210ENST00000511988 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
SUB1-210ENST00000511988 GCKRQ14397 625 aa12.78□□□□□ -0.36
SUB1-210ENST00000511988 HLFQ16534 295 aa12.78□□□□□ -0.36
SUB1-210ENST00000511988 PARP10Q53GL7 1025 aa12.78□□□□□ -0.36
SUB1-210ENST00000511988 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
SUB1-210ENST00000511988 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
SUB1-210ENST00000511988 PPP4R2Q9NY27 417 aa12.78□□□□□ -0.36
SUB1-210ENST00000511988 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
SUB1-210ENST00000511988 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
SUB1-210ENST00000511988 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
SUB1-210ENST00000511988 C9orf78Q9NZ63 289 aaPredicted RBP12.77□□□□□ -0.37
SUB1-210ENST00000511988 MYH3P11055 1940 aa12.77□□□□□ -0.37
SUB1-210ENST00000511988 GNAI2P04899 355 aa12.76□□□□□ -0.37
SUB1-210ENST00000511988 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
SUB1-210ENST00000511988 MSL1Q68DK7 614 aa12.76□□□□□ -0.37
SUB1-210ENST00000511988 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
SUB1-210ENST00000511988 C16orf71Q8IYS4 520 aaPredicted RBP12.76□□□□□ -0.37
SUB1-210ENST00000511988 FSTL1Q12841 308 aa12.75□□□□□ -0.37
SUB1-210ENST00000511988 UBN2Q6ZU65 1347 aa12.75□□□□□ -0.37
SUB1-210ENST00000511988 DDX60Q8IY21 1712 aaKnown RBP12.75□□□□□ -0.37
SUB1-210ENST00000511988 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
SUB1-210ENST00000511988 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
SUB1-210ENST00000511988 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
SUB1-210ENST00000511988 NIP7Q9Y221 180 aaKnown RBP eCLIP12.75□□□□□ -0.37
SUB1-210ENST00000511988 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
SUB1-210ENST00000511988 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
SUB1-210ENST00000511988 GPTP24298 496 aa12.74□□□□□ -0.37
SUB1-210ENST00000511988 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
SUB1-210ENST00000511988 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
SUB1-210ENST00000511988 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
SUB1-210ENST00000511988 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
SUB1-210ENST00000511988 RIC1Q4ADV7 1423 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 H7C1W4 665 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
SUB1-210ENST00000511988 GYS1P13807 737 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
SUB1-210ENST00000511988 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
SUB1-210ENST00000511988 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
SUB1-210ENST00000511988 NRXN2Q9P2S2 1712 aa12.73□□□□□ -0.37
SUB1-210ENST00000511988 SH3TC1Q8TE82 1336 aa12.72□□□□□ -0.37
SUB1-210ENST00000511988 CASP7P55210 303 aa12.72□□□□□ -0.37
SUB1-210ENST00000511988 TBC1D9BQ66K14 1250 aa12.72□□□□□ -0.37
SUB1-210ENST00000511988 RPAP2Q8IXW5 612 aaPredicted RBP12.72□□□□□ -0.37
SUB1-210ENST00000511988 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
SUB1-210ENST00000511988 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms