RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 NUTM1Q86Y26 1132 aa25.56■■□□□ 1.68
HMGCS1-206ENST00000511774 TNRC18O15417 2968 aaPredicted RBP25.55■■□□□ 1.68
HMGCS1-206ENST00000511774 CCDC85CA6NKD9 419 aa25.54■■□□□ 1.68
HMGCS1-206ENST00000511774 RGL2O15211 777 aa25.54■■□□□ 1.68
HMGCS1-206ENST00000511774 GRM1Q13255 1194 aa25.54■■□□□ 1.68
HMGCS1-206ENST00000511774 DCTN1Q14203 1278 aa25.54■■□□□ 1.68
HMGCS1-206ENST00000511774 JDP2Q8WYK2 163 aa25.54■■□□□ 1.68
HMGCS1-206ENST00000511774 AOC2O75106 756 aa25.53■■□□□ 1.68
HMGCS1-206ENST00000511774 RGS19P49795 217 aa25.53■■□□□ 1.68
HMGCS1-206ENST00000511774 GPR101Q96P66 508 aaPredicted RBP25.53■■□□□ 1.68
HMGCS1-206ENST00000511774 LAMB4A4D0S4 1761 aa25.53■■□□□ 1.68
HMGCS1-206ENST00000511774 CASP8AP2Q9UKL3 1982 aa25.53■■□□□ 1.68
HMGCS1-206ENST00000511774 EIF6P56537 245 aaKnown RBP25.52■■□□□ 1.68
HMGCS1-206ENST00000511774 PAXIP1Q6ZW49 1069 aaPredicted RBP25.52■■□□□ 1.68
HMGCS1-206ENST00000511774 NPC1L1Q9UHC9 1359 aa25.52■■□□□ 1.68
HMGCS1-206ENST00000511774 MLLT1Q03111 559 aaPredicted RBP25.5■■□□□ 1.67
HMGCS1-206ENST00000511774 TLL2Q9Y6L7 1015 aa25.5■■□□□ 1.67
HMGCS1-206ENST00000511774 GTF2E1P29083 439 aaPredicted RBP25.49■■□□□ 1.67
HMGCS1-206ENST00000511774 LMOD1P29536 600 aaPredicted RBP25.49■■□□□ 1.67
HMGCS1-206ENST00000511774 C3orf67Q6ZVT6 689 aa25.49■■□□□ 1.67
HMGCS1-206ENST00000511774 RIC1Q4ADV7 1423 aa25.48■■□□□ 1.67
HMGCS1-206ENST00000511774 UBN2Q6ZU65 1347 aa25.48■■□□□ 1.67
HMGCS1-206ENST00000511774 HOXA10P31260 410 aaPredicted RBP25.48■■□□□ 1.67
HMGCS1-206ENST00000511774 LARGE2Q8N3Y3 721 aa25.48■■□□□ 1.67
HMGCS1-206ENST00000511774 MIS18AQ9NYP9 233 aa25.48■■□□□ 1.67
HMGCS1-206ENST00000511774 ECE1P42892 770 aa25.47■■□□□ 1.67
HMGCS1-206ENST00000511774 NGEFQ8N5V2 710 aa25.47■■□□□ 1.67
HMGCS1-206ENST00000511774 TCERG1O14776 1098 aaKnown RBP25.46■■□□□ 1.67
HMGCS1-206ENST00000511774 CC2D2BQ6DHV5 1058 aa25.46■■□□□ 1.67
HMGCS1-206ENST00000511774 TTLL7Q6ZT98 887 aa25.46■■□□□ 1.67
HMGCS1-206ENST00000511774 USP50Q70EL3 339 aaPredicted RBP25.46■■□□□ 1.67
HMGCS1-206ENST00000511774 BEGAINQ9BUH8 593 aa25.45■■□□□ 1.66
HMGCS1-206ENST00000511774 PDE4DIPQ5VU43 2346 aa25.45■■□□□ 1.66
HMGCS1-206ENST00000511774 KDM3BQ7LBC6 1761 aa25.44■■□□□ 1.66
HMGCS1-206ENST00000511774 GPTP24298 496 aa25.44■■□□□ 1.66
HMGCS1-206ENST00000511774 RTF1Q92541 710 aaKnown RBP25.44■■□□□ 1.66
HMGCS1-206ENST00000511774 NYXQ9GZU5 481 aa25.44■■□□□ 1.66
HMGCS1-206ENST00000511774 MAP3K15Q6ZN16 1313 aa25.43■■□□□ 1.66
HMGCS1-206ENST00000511774 SUSD4Q5VX71 490 aa25.43■■□□□ 1.66
HMGCS1-206ENST00000511774 SAPCD2Q86UD0 394 aa25.43■■□□□ 1.66
HMGCS1-206ENST00000511774 RPGRQ92834 1020 aaKnown RBP25.43■■□□□ 1.66
HMGCS1-206ENST00000511774 MCOLN1Q9GZU1 580 aa25.43■■□□□ 1.66
HMGCS1-206ENST00000511774 GPRC5DQ9NZD1 345 aa25.43■■□□□ 1.66
HMGCS1-206ENST00000511774 ERVV-1B6SEH8 477 aa25.42■■□□□ 1.66
HMGCS1-206ENST00000511774 MAP2K2P36507 400 aa25.42■■□□□ 1.66
HMGCS1-206ENST00000511774 AOC3Q16853 763 aa25.42■■□□□ 1.66
HMGCS1-206ENST00000511774 CRAMP1Q96RY5 1269 aa25.42■■□□□ 1.66
HMGCS1-206ENST00000511774 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
HMGCS1-206ENST00000511774 PPEF1O14829 653 aaPredicted RBP25.41■■□□□ 1.66
HMGCS1-206ENST00000511774 NIM1KQ8IY84 436 aa25.41■■□□□ 1.66
HMGCS1-206ENST00000511774 GLIS2Q9BZE0 524 aaPredicted RBP25.41■■□□□ 1.66
HMGCS1-206ENST00000511774 IBTKQ9P2D0 1353 aaPredicted RBP25.41■■□□□ 1.66
HMGCS1-206ENST00000511774 PPIP5K2O43314 1243 aa25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 CELF2O95319 508 aaKnown RBP25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 NTSR2O95665 410 aa25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 U2AF1L5P0DN76 240 aaPredicted RBP25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 U2AF1Q01081 240 aaKnown RBP eCLIP25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 CXCL9Q07325 125 aa25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 TAF7Q15545 349 aaPredicted RBP25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 ADARB2Q9NS39 739 aaKnown RBP25.4■■□□□ 1.66
HMGCS1-206ENST00000511774 ZIC5Q96T25 663 aa25.39■■□□□ 1.66
HMGCS1-206ENST00000511774 ZBTB3Q9H5J0 574 aa25.39■■□□□ 1.66
HMGCS1-206ENST00000511774 RRP7AQ9Y3A4 280 aaKnown RBP25.39■■□□□ 1.66
HMGCS1-206ENST00000511774 ZNF34Q8IZ26 560 aa25.38■■□□□ 1.65
HMGCS1-206ENST00000511774 RBM17Q96I25 401 aaKnown RBP25.38■■□□□ 1.65
HMGCS1-206ENST00000511774 LAMB2P55268 1798 aa25.37■■□□□ 1.65
HMGCS1-206ENST00000511774 HTATSF1O43719 755 aaKnown RBP25.37■■□□□ 1.65
HMGCS1-206ENST00000511774 GMPSP49915 693 aaPredicted RBP25.37■■□□□ 1.65
HMGCS1-206ENST00000511774 HIRAP54198 1017 aaPredicted RBP25.37■■□□□ 1.65
HMGCS1-206ENST00000511774 SHTN1A0MZ66 631 aa25.36■■□□□ 1.65
HMGCS1-206ENST00000511774 MYL6BP14649 208 aa25.36■■□□□ 1.65
HMGCS1-206ENST00000511774 GRIPAP1Q4V328 841 aa25.36■■□□□ 1.65
HMGCS1-206ENST00000511774 CFAP53Q96M91 514 aa25.36■■□□□ 1.65
HMGCS1-206ENST00000511774 PGAP2Q9UHJ9 254 aa25.36■■□□□ 1.65
HMGCS1-206ENST00000511774 CIAPIN1Q6FI81 312 aa25.35■■□□□ 1.65
HMGCS1-206ENST00000511774 DLK2Q6UY11 383 aa25.35■■□□□ 1.65
HMGCS1-206ENST00000511774 CFAP44Q96MT7 982 aa25.35■■□□□ 1.65
HMGCS1-206ENST00000511774 TAF1P21675 1872 aa25.34■■□□□ 1.65
HMGCS1-206ENST00000511774 BRPF1P55201 1214 aaPredicted RBP25.34■■□□□ 1.65
HMGCS1-206ENST00000511774 TRPM4Q8TD43 1214 aa25.34■■□□□ 1.65
HMGCS1-206ENST00000511774 ZNRF3Q9ULT6 936 aa25.34■■□□□ 1.65
HMGCS1-206ENST00000511774 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
HMGCS1-206ENST00000511774 EIF4A1P60842 406 aaKnown RBP25.33■■□□□ 1.65
HMGCS1-206ENST00000511774 KIF6Q6ZMV9 814 aa25.33■■□□□ 1.65
HMGCS1-206ENST00000511774 HHIPL1Q96JK4 782 aa25.33■■□□□ 1.65
HMGCS1-206ENST00000511774 RTFDC1Q9BY42 306 aaPredicted RBP25.33■■□□□ 1.65
HMGCS1-206ENST00000511774 ZNF408Q9H9D4 720 aa25.33■■□□□ 1.65
HMGCS1-206ENST00000511774 NUDCQ9Y266 331 aa25.33■■□□□ 1.65
HMGCS1-206ENST00000511774 ABCC4O15439 1325 aa25.33■■□□□ 1.64
HMGCS1-206ENST00000511774 CA12O43570 354 aa25.32■■□□□ 1.64
HMGCS1-206ENST00000511774 PPP2R1AP30153 589 aa25.32■■□□□ 1.64
HMGCS1-206ENST00000511774 DGKZQ13574 1117 aa25.32■■□□□ 1.64
HMGCS1-206ENST00000511774 GIGYF2Q6Y7W6 1299 aaKnown RBP25.31■■□□□ 1.64
HMGCS1-206ENST00000511774 THUMPD2Q9BTF0 503 aaKnown RBP25.31■■□□□ 1.64
HMGCS1-206ENST00000511774 POLR2AP24928 1970 aaKnown RBP25.31■■□□□ 1.64
HMGCS1-206ENST00000511774 RAD17O75943 681 aa25.3■■□□□ 1.64
HMGCS1-206ENST00000511774 LRP10Q7Z4F1 713 aa25.3■■□□□ 1.64
HMGCS1-206ENST00000511774 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
HMGCS1-206ENST00000511774 DUOX1Q9NRD9 1551 aa25.29■■□□□ 1.64
HMGCS1-206ENST00000511774 YDJCA8MPS7 323 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms