RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 ITGAEP38570 1179 aa10.02□□□□□ -0.81
NR1I3-229ENST00000511748 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
NR1I3-229ENST00000511748 NR5A1Q13285 461 aa10.02□□□□□ -0.81
NR1I3-229ENST00000511748 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.81
NR1I3-229ENST00000511748 RGPD1P0DJD0 1748 aa10.02□□□□□ -0.81
NR1I3-229ENST00000511748 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
NR1I3-229ENST00000511748 RAB15P59190 212 aa10.01□□□□□ -0.81
NR1I3-229ENST00000511748 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-229ENST00000511748 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
NR1I3-229ENST00000511748 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
NR1I3-229ENST00000511748 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
NR1I3-229ENST00000511748 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
NR1I3-229ENST00000511748 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
NR1I3-229ENST00000511748 DGAT1O75907 488 aa10□□□□□ -0.81
NR1I3-229ENST00000511748 AVPP01185 164 aa10□□□□□ -0.81
NR1I3-229ENST00000511748 LAPTM4AQ15012 233 aa10□□□□□ -0.81
NR1I3-229ENST00000511748 HDGFL1Q5TGJ6 251 aa10□□□□□ -0.81
NR1I3-229ENST00000511748 WWC1Q8IX03 1113 aa10□□□□□ -0.81
NR1I3-229ENST00000511748 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
NR1I3-229ENST00000511748 ADGRB2O60241 1585 aa10□□□□□ -0.81
NR1I3-229ENST00000511748 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
NR1I3-229ENST00000511748 NRXN1Q9ULB1 1477 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 MYT1Q01538 1121 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 NBPF20Q3BBV1 942 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 TMPRSS4Q9NRS4 437 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
NR1I3-229ENST00000511748 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
NR1I3-229ENST00000511748 MCCD1P59942 119 aaPredicted RBP9.98□□□□□ -0.81
NR1I3-229ENST00000511748 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
NR1I3-229ENST00000511748 ITPKCQ96DU7 683 aa9.98□□□□□ -0.81
NR1I3-229ENST00000511748 CCDC85AQ96PX6 553 aaPredicted RBP9.98□□□□□ -0.81
NR1I3-229ENST00000511748 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
NR1I3-229ENST00000511748 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
NR1I3-229ENST00000511748 YTHDC2Q9H6S0 1430 aaKnown RBP9.98□□□□□ -0.81
NR1I3-229ENST00000511748 ABCA3Q99758 1704 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 TIMP2P16035 220 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 SOX11P35716 441 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-229ENST00000511748 WAPLQ7Z5K2 1190 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 GLMNQ92990 594 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 STK26Q9P289 416 aa9.97□□□□□ -0.81
NR1I3-229ENST00000511748 COL14A1Q05707 1796 aaKnown RBP9.96□□□□□ -0.81
NR1I3-229ENST00000511748 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-229ENST00000511748 ST8SIA5O15466 376 aa9.96□□□□□ -0.82
NR1I3-229ENST00000511748 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
NR1I3-229ENST00000511748 ADGRF5Q8IZF2 1346 aa9.96□□□□□ -0.82
NR1I3-229ENST00000511748 DHX57Q6P158 1386 aaKnown RBP9.96□□□□□ -0.82
NR1I3-229ENST00000511748 SPATA31E1Q6ZUB1 1445 aa9.96□□□□□ -0.82
NR1I3-229ENST00000511748 Q6ZNB5 142 aa9.95□□□□□ -0.82
NR1I3-229ENST00000511748 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
NR1I3-229ENST00000511748 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-229ENST00000511748 DACH1Q9UI36 760 aa9.95□□□□□ -0.82
NR1I3-229ENST00000511748 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
NR1I3-229ENST00000511748 NRAPQ86VF7 1730 aa9.95□□□□□ -0.82
NR1I3-229ENST00000511748 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
NR1I3-229ENST00000511748 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-229ENST00000511748 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
NR1I3-229ENST00000511748 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
NR1I3-229ENST00000511748 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 PLEKHH1Q9ULM0 1364 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 SPATA31A5Q5VU36 1347 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 SPATA31A7Q8IWB4 1347 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 LILRA1O75019 489 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
NR1I3-229ENST00000511748 CBLBQ13191 982 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 ZNF784Q8NCA9 323 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-229ENST00000511748 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 C14orf93Q9H972 538 aaKnown RBP9.93□□□□□ -0.82
NR1I3-229ENST00000511748 THSD7AQ9UPZ6 1657 aa9.93□□□□□ -0.82
NR1I3-229ENST00000511748 SCTRP47872 440 aa9.92□□□□□ -0.82
NR1I3-229ENST00000511748 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-229ENST00000511748 R3HDM1Q15032 1099 aaKnown RBP9.92□□□□□ -0.82
NR1I3-229ENST00000511748 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
NR1I3-229ENST00000511748 TBC1D9Q6ZT07 1266 aa9.92□□□□□ -0.82
NR1I3-229ENST00000511748 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
NR1I3-229ENST00000511748 EMILIN1Q9Y6C2 1016 aa9.92□□□□□ -0.82
NR1I3-229ENST00000511748 TNS1Q9HBL0 1735 aaKnown RBP9.92□□□□□ -0.82
NR1I3-229ENST00000511748 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-229ENST00000511748 CAPN5O15484 640 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-229ENST00000511748 YY1P25490 414 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 TMEM132EQ6IEE7 984 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 TRAF7Q6Q0C0 670 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 ZNF592Q92610 1267 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 CALR3Q96L12 384 aaKnown RBP9.91□□□□□ -0.82
NR1I3-229ENST00000511748 PCDHB11Q9Y5F2 797 aa9.91□□□□□ -0.82
NR1I3-229ENST00000511748 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-229ENST00000511748 NINLQ9Y2I6 1382 aa9.9□□□□□ -0.82
NR1I3-229ENST00000511748 ALS2Q96Q42 1657 aa9.9□□□□□ -0.82
NR1I3-229ENST00000511748 DHX9Q08211 1270 aaKnown RBP9.9□□□□□ -0.82
NR1I3-229ENST00000511748 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
NR1I3-229ENST00000511748 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
NR1I3-229ENST00000511748 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms