RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 ATF3P18847 181 aa17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
AP003555.1-202ENST00000511013 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 MYL6BP14649 208 aa17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 SYT1P21579 422 aa17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 CCDC8Q9H0W5 538 aaPredicted RBP17.06■□□□□ 0.32
AP003555.1-202ENST00000511013 NMIQ13287 307 aaPredicted RBP17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 MYD88Q99836 296 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 F13A1P00488 732 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
AP003555.1-202ENST00000511013 COL15A1P39059 1388 aa17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 MRC1P22897 1456 aa17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 COL18A1P39060 1754 aa17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 ANKRD1Q15327 319 aa17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 FAM184AQ8NB25 1140 aa17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
AP003555.1-202ENST00000511013 DCCP43146 1447 aa17.03■□□□□ 0.32
AP003555.1-202ENST00000511013 UBE2HP62256 183 aa17.03■□□□□ 0.32
AP003555.1-202ENST00000511013 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
AP003555.1-202ENST00000511013 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
AP003555.1-202ENST00000511013 CCDC83Q8IWF9 413 aa17.03■□□□□ 0.32
AP003555.1-202ENST00000511013 SIL1Q9H173 461 aa17.03■□□□□ 0.32
AP003555.1-202ENST00000511013 GJB2P29033 226 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 MCM5P33992 734 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 UVSSAQ2YD98 709 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 NOL7Q9UMY1 257 aaKnown RBP17.02■□□□□ 0.32
AP003555.1-202ENST00000511013 SLC27A2O14975 620 aa17.02■□□□□ 0.31
AP003555.1-202ENST00000511013 CPA1P15085 419 aa17.02■□□□□ 0.31
AP003555.1-202ENST00000511013 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.31
AP003555.1-202ENST00000511013 MEGF6O75095 1541 aa17.01■□□□□ 0.31
AP003555.1-202ENST00000511013 AFDNP55196 1824 aaKnown RBP17.01■□□□□ 0.31
AP003555.1-202ENST00000511013 ATP5JP18859 108 aa17.01■□□□□ 0.31
AP003555.1-202ENST00000511013 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
AP003555.1-202ENST00000511013 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
AP003555.1-202ENST00000511013 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
AP003555.1-202ENST00000511013 RFX7Q2KHR2 1363 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 MED23Q9ULK4 1368 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 LARGE1O95461 756 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 PDCP20941 246 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
AP003555.1-202ENST00000511013 CABP4P57796 275 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 KRT32Q14532 448 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
AP003555.1-202ENST00000511013 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 MTMR6Q9Y217 621 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 USP16Q9Y5T5 823 aa17■□□□□ 0.31
AP003555.1-202ENST00000511013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
AP003555.1-202ENST00000511013 A0A0D9SFI3 127 aa16.99■□□□□ 0.31
AP003555.1-202ENST00000511013 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
AP003555.1-202ENST00000511013 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
AP003555.1-202ENST00000511013 JCADQ9P266 1359 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 CYP27B1O15528 508 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 ZNF500O60304 480 aaPredicted RBP16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 OFD1O75665 1012 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 ME3Q16798 604 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 TNS3Q68CZ2 1445 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 ARFGEF2Q9Y6D5 1785 aa16.98■□□□□ 0.31
AP003555.1-202ENST00000511013 RPS6KB1P23443 525 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 CADPS2Q86UW7 1296 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 RNF214Q8ND24 703 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 ZKSCAN5Q9Y2L8 839 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 TMEM94Q12767 1356 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 LAMB4A4D0S4 1761 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 TPM2P07951 284 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 USPL1Q5W0Q7 1092 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
AP003555.1-202ENST00000511013 CPDO75976 1380 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms