RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 COPS6Q7L5N1 327 aa34.76■■■■□ 3.16
SNF8-208ENST00000510195 RPGRQ92834 1020 aaKnown RBP34.76■■■■□ 3.16
SNF8-208ENST00000510195 ANXA1P04083 346 aa34.74■■■■□ 3.15
SNF8-208ENST00000510195 DNAJC5GQ8N7S2 189 aa34.74■■■■□ 3.15
SNF8-208ENST00000510195 CRAMP1Q96RY5 1269 aa34.74■■■■□ 3.15
SNF8-208ENST00000510195 UTP14AQ9BVJ6 771 aaKnown RBP34.74■■■■□ 3.15
SNF8-208ENST00000510195 ZEB1P37275 1124 aaPredicted RBP34.73■■■■□ 3.15
SNF8-208ENST00000510195 SLC10A5Q5PT55 438 aa34.73■■■■□ 3.15
SNF8-208ENST00000510195 RBM17Q96I25 401 aaKnown RBP34.73■■■■□ 3.15
SNF8-208ENST00000510195 XAGE3Q8WTP9 111 aa34.72■■■■□ 3.15
SNF8-208ENST00000510195 NECTIN2Q92692 538 aa34.72■■■■□ 3.15
SNF8-208ENST00000510195 NLRP3Q96P20 1036 aa34.72■■■■□ 3.15
SNF8-208ENST00000510195 PSMD1Q99460 953 aa34.72■■■■□ 3.15
SNF8-208ENST00000510195 CALD1Q05682 793 aaKnown RBP34.71■■■■□ 3.15
SNF8-208ENST00000510195 KRT24Q2M2I5 525 aa34.71■■■■□ 3.15
SNF8-208ENST00000510195 AIMP1Q12904 312 aaKnown RBP34.7■■■■□ 3.15
SNF8-208ENST00000510195 HDGFL1Q5TGJ6 251 aa34.7■■■■□ 3.15
SNF8-208ENST00000510195 OLFM4Q6UX06 510 aa34.7■■■■□ 3.15
SNF8-208ENST00000510195 DDNO94850 711 aaPredicted RBP34.69■■■■□ 3.14
SNF8-208ENST00000510195 TCIRG1Q13488 830 aa34.69■■■■□ 3.14
SNF8-208ENST00000510195 ZNF277Q9NRM2 450 aaPredicted RBP34.69■■■■□ 3.14
SNF8-208ENST00000510195 DBF4Q9UBU7 674 aaPredicted RBP34.69■■■■□ 3.14
SNF8-208ENST00000510195 APAF1O14727 1248 aa34.68■■■■□ 3.14
SNF8-208ENST00000510195 ZNF853P0CG23 659 aa34.68■■■■□ 3.14
SNF8-208ENST00000510195 SYNE4Q8N205 404 aa34.68■■■■□ 3.14
SNF8-208ENST00000510195 SNED1Q8TER0 1413 aa34.68■■■■□ 3.14
SNF8-208ENST00000510195 IARSP41252 1262 aaKnown RBP34.67■■■■□ 3.14
SNF8-208ENST00000510195 L3MBTL3Q96JM7 780 aaPredicted RBP34.67■■■■□ 3.14
SNF8-208ENST00000510195 CHPF2Q9P2E5 772 aa34.67■■■■□ 3.14
SNF8-208ENST00000510195 IQCA1LA6NCM1 817 aa34.66■■■■□ 3.14
SNF8-208ENST00000510195 NLRP10Q86W26 655 aa34.66■■■■□ 3.14
SNF8-208ENST00000510195 MBIPQ9NS73 344 aa34.66■■■■□ 3.14
SNF8-208ENST00000510195 IFT57Q9NWB7 429 aa34.66■■■■□ 3.14
SNF8-208ENST00000510195 ANKRD36CQ5JPF3 1778 aa34.66■■■■□ 3.14
SNF8-208ENST00000510195 GNAI1P63096 354 aa34.65■■■■□ 3.14
SNF8-208ENST00000510195 DUSP27Q5VZP5 1158 aa34.64■■■■□ 3.14
SNF8-208ENST00000510195 PLBD2Q8NHP8 589 aa34.64■■■■□ 3.14
SNF8-208ENST00000510195 HYPKQ9NX55 129 aa34.64■■■■□ 3.14
SNF8-208ENST00000510195 FZD9O00144 591 aa34.62■■■■□ 3.13
SNF8-208ENST00000510195 PPEF1O14829 653 aaPredicted RBP34.62■■■■□ 3.13
SNF8-208ENST00000510195 ANKRD13DQ6ZTN6 518 aa34.62■■■■□ 3.13
SNF8-208ENST00000510195 C3orf67Q6ZVT6 689 aa34.62■■■■□ 3.13
SNF8-208ENST00000510195 SCN4AP35499 1836 aa34.61■■■■□ 3.13
SNF8-208ENST00000510195 JDP2Q8WYK2 163 aa34.61■■■■□ 3.13
SNF8-208ENST00000510195 KLRG1Q96E93 195 aa34.61■■■■□ 3.13
SNF8-208ENST00000510195 TMX4Q9H1E5 349 aaPredicted RBP34.61■■■■□ 3.13
SNF8-208ENST00000510195 TRMT112Q9UI30 125 aaKnown RBP34.61■■■■□ 3.13
SNF8-208ENST00000510195 SH3TC1Q8TE82 1336 aa34.59■■■■□ 3.13
SNF8-208ENST00000510195 CHMP4AQ9BY43 222 aa34.59■■■■□ 3.13
SNF8-208ENST00000510195 BBOX1O75936 387 aa34.57■■■■□ 3.12
SNF8-208ENST00000510195 CHADLQ6NUI6 762 aa34.57■■■■□ 3.12
SNF8-208ENST00000510195 VPS33BQ9H267 617 aa34.57■■■■□ 3.12
SNF8-208ENST00000510195 ATP6V0A2Q9Y487 856 aa34.57■■■■□ 3.12
SNF8-208ENST00000510195 ZNF541Q9H0D2 1346 aa34.56■■■■□ 3.12
SNF8-208ENST00000510195 HTRA3P83110 453 aa34.56■■■■□ 3.12
SNF8-208ENST00000510195 GPC2Q8N158 579 aa34.55■■■■□ 3.12
SNF8-208ENST00000510195 ISCA1Q9BUE6 129 aa34.55■■■■□ 3.12
SNF8-208ENST00000510195 TAF1DQ9H5J8 278 aaPredicted RBP34.55■■■■□ 3.12
SNF8-208ENST00000510195 ABCC4O15439 1325 aa34.54■■■■□ 3.12
SNF8-208ENST00000510195 HCLS1P14317 486 aaPredicted RBP34.53■■■■□ 3.12
SNF8-208ENST00000510195 TRIM28Q13263 835 aaKnown RBP34.53■■■■□ 3.12
SNF8-208ENST00000510195 LDHDQ86WU2 507 aa34.53■■■■□ 3.12
SNF8-208ENST00000510195 JMYQ8N9B5 988 aa34.53■■■■□ 3.12
SNF8-208ENST00000510195 HACL1Q9UJ83 578 aa34.53■■■■□ 3.12
SNF8-208ENST00000510195 DDX46Q7L014 1031 aaKnown RBP34.52■■■■□ 3.12
SNF8-208ENST00000510195 EIF6P56537 245 aaKnown RBP34.51■■■■□ 3.12
SNF8-208ENST00000510195 SP8Q8IXZ3 490 aa34.51■■■■□ 3.12
SNF8-208ENST00000510195 LARGE2Q8N3Y3 721 aa34.51■■■■□ 3.12
SNF8-208ENST00000510195 TCERG1O14776 1098 aaKnown RBP34.5■■■■□ 3.11
SNF8-208ENST00000510195 CCDC27Q2M243 656 aa34.5■■■■□ 3.11
SNF8-208ENST00000510195 SUPT20HQ8NEM7 779 aa34.5■■■■□ 3.11
SNF8-208ENST00000510195 LAMB2P55268 1798 aa34.49■■■■□ 3.11
SNF8-208ENST00000510195 TMC4Q7Z404 712 aa34.49■■■■□ 3.11
SNF8-208ENST00000510195 PNMA8AQ86V59 439 aaPredicted RBP34.49■■■■□ 3.11
SNF8-208ENST00000510195 RTFDC1Q9BY42 306 aaPredicted RBP34.49■■■■□ 3.11
SNF8-208ENST00000510195 POTEIP0CG38 1075 aa34.48■■■■□ 3.11
SNF8-208ENST00000510195 POTEJP0CG39 1038 aa34.48■■■■□ 3.11
SNF8-208ENST00000510195 GRAPQ13588 217 aa34.48■■■■□ 3.11
SNF8-208ENST00000510195 NCBP3Q53F19 620 aaKnown RBP34.48■■■■□ 3.11
SNF8-208ENST00000510195 GRAPLQ8TC17 118 aaPredicted RBP34.48■■■■□ 3.11
SNF8-208ENST00000510195 PCNTO95613 3336 aa34.47■■■■□ 3.11
SNF8-208ENST00000510195 GOLGA2Q08379 1002 aa34.47■■■■□ 3.11
SNF8-208ENST00000510195 EPHX2P34913 555 aa34.46■■■■□ 3.11
SNF8-208ENST00000510195 CCDC184Q52MB2 194 aa34.46■■■■□ 3.11
SNF8-208ENST00000510195 RIC3Q7Z5B4 369 aa34.46■■■■□ 3.11
SNF8-208ENST00000510195 ATP5J2-PTCD1G3V325 749 aa34.45■■■■□ 3.11
SNF8-208ENST00000510195 ELL2O00472 640 aaPredicted RBP34.45■■■■□ 3.11
SNF8-208ENST00000510195 SF3B3Q15393 1217 aaKnown RBP34.45■■■■□ 3.11
SNF8-208ENST00000510195 NIM1KQ8IY84 436 aa34.45■■■■□ 3.11
SNF8-208ENST00000510195 C8orf58Q8NAV2 365 aa34.45■■■■□ 3.11
SNF8-208ENST00000510195 COL4A5P29400 1685 aa34.44■■■■□ 3.1
SNF8-208ENST00000510195 ZNF316A6NFI3 1004 aaPredicted RBP34.44■■■■□ 3.1
SNF8-208ENST00000510195 PPIP5K2O43314 1243 aa34.44■■■■□ 3.1
SNF8-208ENST00000510195 CCDC30Q5VVM6 783 aa34.44■■■■□ 3.1
SNF8-208ENST00000510195 FAM89AQ96GI7 184 aa34.44■■■■□ 3.1
SNF8-208ENST00000510195 DPP8Q6V1X1 898 aaPredicted RBP34.43■■■■□ 3.1
SNF8-208ENST00000510195 MPNDQ8N594 471 aa34.43■■■■□ 3.1
SNF8-208ENST00000510195 PHAXQ9H814 394 aaKnown RBP34.43■■■■□ 3.1
SNF8-208ENST00000510195 CREBZFQ9NS37 354 aa34.43■■■■□ 3.1
SNF8-208ENST00000510195 HSP90B1P14625 803 aaKnown RBP34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms