RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 PLBD2Q8NHP8 589 aa30.63■■■□□ 2.49
ATP2C1-217ENST00000509662 SLX4Q8IY92 1834 aa30.62■■■□□ 2.49
ATP2C1-217ENST00000509662 NFKBIEO00221 500 aa30.62■■■□□ 2.49
ATP2C1-217ENST00000509662 C8orf58Q8NAV2 365 aa30.62■■■□□ 2.49
ATP2C1-217ENST00000509662 ZC3H4Q9UPT8 1303 aaKnown RBP30.62■■■□□ 2.49
ATP2C1-217ENST00000509662 CRY2Q49AN0 593 aa30.61■■■□□ 2.49
ATP2C1-217ENST00000509662 RPGRQ92834 1020 aaKnown RBP30.61■■■□□ 2.49
ATP2C1-217ENST00000509662 RNF123Q5XPI4 1314 aa30.61■■■□□ 2.49
ATP2C1-217ENST00000509662 KDM2BQ8NHM5 1336 aa30.61■■■□□ 2.49
ATP2C1-217ENST00000509662 ABCC12Q96J65 1359 aa30.6■■■□□ 2.49
ATP2C1-217ENST00000509662 RIC1Q4ADV7 1423 aa30.59■■■□□ 2.49
ATP2C1-217ENST00000509662 LTBP3Q9NS15 1303 aa30.59■■■□□ 2.49
ATP2C1-217ENST00000509662 CCDC30Q5VVM6 783 aa30.59■■■□□ 2.49
ATP2C1-217ENST00000509662 NLRP10Q86W26 655 aa30.59■■■□□ 2.49
ATP2C1-217ENST00000509662 NLRP3Q96P20 1036 aa30.59■■■□□ 2.49
ATP2C1-217ENST00000509662 TAOK3Q9H2K8 898 aa30.59■■■□□ 2.49
ATP2C1-217ENST00000509662 CCDC93Q567U6 631 aa30.58■■■□□ 2.49
ATP2C1-217ENST00000509662 SLC10A5Q5PT55 438 aa30.58■■■□□ 2.49
ATP2C1-217ENST00000509662 TSPYL6Q8N831 410 aa30.58■■■□□ 2.49
ATP2C1-217ENST00000509662 C7orf43Q8WVR3 580 aa30.58■■■□□ 2.49
ATP2C1-217ENST00000509662 CACNA1SQ13698 1873 aa30.58■■■□□ 2.49
ATP2C1-217ENST00000509662 ARFGEF2Q9Y6D5 1785 aa30.58■■■□□ 2.49
ATP2C1-217ENST00000509662 HOXA10P31260 410 aaPredicted RBP30.56■■■□□ 2.48
ATP2C1-217ENST00000509662 PRELPP51888 382 aa30.56■■■□□ 2.48
ATP2C1-217ENST00000509662 RBM17Q96I25 401 aaKnown RBP30.56■■■□□ 2.48
ATP2C1-217ENST00000509662 TRMT112Q9UI30 125 aaKnown RBP30.56■■■□□ 2.48
ATP2C1-217ENST00000509662 FER1L6Q2WGJ9 1857 aa30.55■■■□□ 2.48
ATP2C1-217ENST00000509662 KIF3CO14782 793 aa30.55■■■□□ 2.48
ATP2C1-217ENST00000509662 GOLGA2Q08379 1002 aa30.55■■■□□ 2.48
ATP2C1-217ENST00000509662 RTKN2Q8IZC4 609 aa30.55■■■□□ 2.48
ATP2C1-217ENST00000509662 MYH16Q9H6N6 1097 aa30.55■■■□□ 2.48
ATP2C1-217ENST00000509662 ANKRD36CQ5JPF3 1778 aa30.54■■■□□ 2.48
ATP2C1-217ENST00000509662 CRAMP1Q96RY5 1269 aa30.54■■■□□ 2.48
ATP2C1-217ENST00000509662 CCDC88AQ3V6T2 1871 aa30.54■■■□□ 2.48
ATP2C1-217ENST00000509662 RIC3Q7Z5B4 369 aa30.53■■■□□ 2.48
ATP2C1-217ENST00000509662 NMRK2Q9NPI5 230 aa30.53■■■□□ 2.48
ATP2C1-217ENST00000509662 TNRC6CQ9HCJ0 1690 aaKnown RBP30.52■■■□□ 2.48
ATP2C1-217ENST00000509662 CC2D2BQ6DHV5 1058 aa30.52■■■□□ 2.48
ATP2C1-217ENST00000509662 SH3TC1Q8TE82 1336 aa30.51■■■□□ 2.48
ATP2C1-217ENST00000509662 TWISTNBQ3B726 338 aaPredicted RBP30.51■■■□□ 2.47
ATP2C1-217ENST00000509662 DPY19L2Q6NUT2 758 aa30.51■■■□□ 2.47
ATP2C1-217ENST00000509662 ISCA1Q9BUE6 129 aa30.51■■■□□ 2.47
ATP2C1-217ENST00000509662 PHAXQ9H814 394 aaKnown RBP30.51■■■□□ 2.47
ATP2C1-217ENST00000509662 GLTPD2A6NH11 291 aa30.5■■■□□ 2.47
ATP2C1-217ENST00000509662 DDX58O95786 925 aaKnown RBP30.5■■■□□ 2.47
ATP2C1-217ENST00000509662 C16orf71Q8IYS4 520 aaPredicted RBP30.5■■■□□ 2.47
ATP2C1-217ENST00000509662 STK31Q9BXU1 1019 aa30.5■■■□□ 2.47
ATP2C1-217ENST00000509662 FKBP4Q02790 459 aaKnown RBP eCLIP30.49■■■□□ 2.47
ATP2C1-217ENST00000509662 EXOSC9Q06265 439 aaKnown RBP30.49■■■□□ 2.47
ATP2C1-217ENST00000509662 TMX4Q9H1E5 349 aaPredicted RBP30.49■■■□□ 2.47
ATP2C1-217ENST00000509662 E9PSI1 815 aa30.48■■■□□ 2.47
ATP2C1-217ENST00000509662 ATP5J2-PTCD1G3V325 749 aa30.48■■■□□ 2.47
ATP2C1-217ENST00000509662 TOMM70O94826 608 aa30.48■■■□□ 2.47
ATP2C1-217ENST00000509662 TRIM28Q13263 835 aaKnown RBP30.48■■■□□ 2.47
ATP2C1-217ENST00000509662 GRIPAP1Q4V328 841 aa30.48■■■□□ 2.47
ATP2C1-217ENST00000509662 RRAGCQ9HB90 399 aa30.48■■■□□ 2.47
ATP2C1-217ENST00000509662 HCLS1P14317 486 aaPredicted RBP30.47■■■□□ 2.47
ATP2C1-217ENST00000509662 C3orf67Q6ZVT6 689 aa30.47■■■□□ 2.47
ATP2C1-217ENST00000509662 SLFN5Q08AF3 891 aa30.46■■■□□ 2.47
ATP2C1-217ENST00000509662 OLFM4Q6UX06 510 aa30.46■■■□□ 2.47
ATP2C1-217ENST00000509662 SYNE4Q8N205 404 aa30.46■■■□□ 2.47
ATP2C1-217ENST00000509662 DICER1Q9UPY3 1922 aaKnown RBP30.45■■■□□ 2.46
ATP2C1-217ENST00000509662 PPEF1O14829 653 aaPredicted RBP30.44■■■□□ 2.46
ATP2C1-217ENST00000509662 CDCA7LQ96GN5 454 aa30.44■■■□□ 2.46
ATP2C1-217ENST00000509662 VAMP4O75379 141 aa30.43■■■□□ 2.46
ATP2C1-217ENST00000509662 DDX46Q7L014 1031 aaKnown RBP30.43■■■□□ 2.46
ATP2C1-217ENST00000509662 TIAM2Q8IVF5 1701 aa30.43■■■□□ 2.46
ATP2C1-217ENST00000509662 FAM89AQ96GI7 184 aa30.43■■■□□ 2.46
ATP2C1-217ENST00000509662 PSMD1Q99460 953 aa30.43■■■□□ 2.46
ATP2C1-217ENST00000509662 BBOX1O75936 387 aa30.42■■■□□ 2.46
ATP2C1-217ENST00000509662 VEGFAP15692 232 aaPredicted RBP30.42■■■□□ 2.46
ATP2C1-217ENST00000509662 HNRNPUQ00839 825 aaKnown RBP eCLIP30.42■■■□□ 2.46
ATP2C1-217ENST00000509662 ZNF428Q96B54 188 aa30.42■■■□□ 2.46
ATP2C1-217ENST00000509662 ZNF277Q9NRM2 450 aaPredicted RBP30.42■■■□□ 2.46
ATP2C1-217ENST00000509662 TCERG1O14776 1098 aaKnown RBP30.41■■■□□ 2.46
ATP2C1-217ENST00000509662 HSP90B1P14625 803 aaKnown RBP30.41■■■□□ 2.46
ATP2C1-217ENST00000509662 MYD88Q99836 296 aa30.41■■■□□ 2.46
ATP2C1-217ENST00000509662 SLC4A2P04920 1241 aa30.4■■■□□ 2.46
ATP2C1-217ENST00000509662 TRMT2AQ8IZ69 625 aaKnown RBP30.4■■■□□ 2.46
ATP2C1-217ENST00000509662 CCDC191Q8NCU4 936 aa30.4■■■□□ 2.46
ATP2C1-217ENST00000509662 METTL22Q9BUU2 404 aaPredicted RBP30.4■■■□□ 2.46
ATP2C1-217ENST00000509662 IARSP41252 1262 aaKnown RBP30.39■■■□□ 2.46
ATP2C1-217ENST00000509662 KSR2Q6VAB6 950 aa30.39■■■□□ 2.46
ATP2C1-217ENST00000509662 RBM46Q8TBY0 533 aaKnown RBP30.39■■■□□ 2.46
ATP2C1-217ENST00000509662 ABCC4O15439 1325 aa30.39■■■□□ 2.46
ATP2C1-217ENST00000509662 ZBTB38Q8NAP3 1195 aaPredicted RBP30.38■■■□□ 2.45
ATP2C1-217ENST00000509662 MAP3K2Q9Y2U5 619 aa30.38■■■□□ 2.45
ATP2C1-217ENST00000509662 ATP6V0A2Q9Y487 856 aa30.38■■■□□ 2.45
ATP2C1-217ENST00000509662 IRS4O14654 1257 aaPredicted RBP30.37■■■□□ 2.45
ATP2C1-217ENST00000509662 RTL5Q5HYW3 569 aaPredicted RBP30.37■■■□□ 2.45
ATP2C1-217ENST00000509662 PI4KAP2A4QPH2 592 aa30.36■■■□□ 2.45
ATP2C1-217ENST00000509662 HSPA6P17066 643 aa30.36■■■□□ 2.45
ATP2C1-217ENST00000509662 NEXNQ0ZGT2 675 aa30.36■■■□□ 2.45
ATP2C1-217ENST00000509662 PI4KAP1Q8N8J0 262 aa30.36■■■□□ 2.45
ATP2C1-217ENST00000509662 JDP2Q8WYK2 163 aa30.36■■■□□ 2.45
ATP2C1-217ENST00000509662 CWC25Q9NXE8 425 aaPredicted RBP30.36■■■□□ 2.45
ATP2C1-217ENST00000509662 GRAPQ13588 217 aa30.35■■■□□ 2.45
ATP2C1-217ENST00000509662 SF3B3Q15393 1217 aaKnown RBP30.35■■■□□ 2.45
ATP2C1-217ENST00000509662 SP8Q8IXZ3 490 aa30.35■■■□□ 2.45
ATP2C1-217ENST00000509662 GRAPLQ8TC17 118 aaPredicted RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms