RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
DDX4-209ENST00000509312 AAMPQ13685 434 aa11.2□□□□□ -0.62
DDX4-209ENST00000509312 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
DDX4-209ENST00000509312 ARSDP51689 593 aa11.19□□□□□ -0.62
DDX4-209ENST00000509312 ALKBH2Q6NS38 261 aa11.19□□□□□ -0.62
DDX4-209ENST00000509312 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
DDX4-209ENST00000509312 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
DDX4-209ENST00000509312 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
DDX4-209ENST00000509312 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
DDX4-209ENST00000509312 NPAS3Q8IXF0 933 aa11.18□□□□□ -0.62
DDX4-209ENST00000509312 KCNMB2Q9Y691 235 aa11.18□□□□□ -0.62
DDX4-209ENST00000509312 PDGFAP04085 211 aa11.17□□□□□ -0.62
DDX4-209ENST00000509312 CD33P20138 364 aa11.17□□□□□ -0.62
DDX4-209ENST00000509312 GAS6Q14393 721 aa11.17□□□□□ -0.62
DDX4-209ENST00000509312 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
DDX4-209ENST00000509312 TMCO4Q5TGY1 634 aa11.17□□□□□ -0.62
DDX4-209ENST00000509312 CMTR1Q8N1G2 835 aaKnown RBP11.17□□□□□ -0.62
DDX4-209ENST00000509312 NUDT16Q96DE0 195 aaKnown RBP11.17□□□□□ -0.62
DDX4-209ENST00000509312 A6NHS1 94 aa11.16□□□□□ -0.62
DDX4-209ENST00000509312 MZF1P28698 734 aaPredicted RBP11.16□□□□□ -0.62
DDX4-209ENST00000509312 CTBSQ01459 385 aa11.16□□□□□ -0.62
DDX4-209ENST00000509312 GGNBP2Q9H3C7 697 aa11.16□□□□□ -0.62
DDX4-209ENST00000509312 ATXN7L1Q9ULK2 861 aaPredicted RBP11.16□□□□□ -0.62
DDX4-209ENST00000509312 MARSP56192 900 aaKnown RBP11.15□□□□□ -0.62
DDX4-209ENST00000509312 KCNQ4P56696 695 aa11.15□□□□□ -0.62
DDX4-209ENST00000509312 NFX1Q12986 1120 aaKnown RBP11.15□□□□□ -0.62
DDX4-209ENST00000509312 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
DDX4-209ENST00000509312 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
DDX4-209ENST00000509312 VSIG8P0DPA2 414 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 FGFR3P22607 806 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 MAPK1P28482 360 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 RNFT1Q5M7Z0 435 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 SLC30A3Q99726 388 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 DCTN4Q9UJW0 460 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 BRPF3Q9ULD4 1205 aa11.14□□□□□ -0.63
DDX4-209ENST00000509312 C2CD2LO14523 706 aa11.13□□□□□ -0.63
DDX4-209ENST00000509312 FOXR1Q6PIV2 292 aa11.13□□□□□ -0.63
DDX4-209ENST00000509312 ZNF775Q96BV0 537 aaPredicted RBP11.13□□□□□ -0.63
DDX4-209ENST00000509312 TRERF1Q96PN7 1200 aa11.13□□□□□ -0.63
DDX4-209ENST00000509312 MARK1Q9P0L2 795 aa11.13□□□□□ -0.63
DDX4-209ENST00000509312 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
DDX4-209ENST00000509312 RAB44Q7Z6P3 723 aaPredicted RBP11.12□□□□□ -0.63
DDX4-209ENST00000509312 GSX2Q9BZM3 304 aa11.12□□□□□ -0.63
DDX4-209ENST00000509312 NDUFB5O43674 189 aa11.11□□□□□ -0.63
DDX4-209ENST00000509312 IGHA2P01877 340 aa11.11□□□□□ -0.63
DDX4-209ENST00000509312 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
DDX4-209ENST00000509312 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
DDX4-209ENST00000509312 GJD3Q8N144 294 aa11.11□□□□□ -0.63
DDX4-209ENST00000509312 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
DDX4-209ENST00000509312 XYLBO75191 536 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 EPB42P16452 691 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 KRT76Q01546 638 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 C8orf34Q49A92 452 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 COL25A1Q9BXS0 654 aaPredicted RBP11.1□□□□□ -0.63
DDX4-209ENST00000509312 RBCK1Q9BYM8 510 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 FAM13BQ9NYF5 915 aa11.1□□□□□ -0.63
DDX4-209ENST00000509312 SASH3O75995 380 aa11.09□□□□□ -0.63
DDX4-209ENST00000509312 SPEM2Q0P670 501 aa11.09□□□□□ -0.63
DDX4-209ENST00000509312 KRT25Q7Z3Z0 450 aa11.09□□□□□ -0.63
DDX4-209ENST00000509312 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
DDX4-209ENST00000509312 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
DDX4-209ENST00000509312 TARSP26639 723 aaKnown RBP11.08□□□□□ -0.64
DDX4-209ENST00000509312 FAM129BQ96TA1 746 aa11.08□□□□□ -0.64
DDX4-209ENST00000509312 ZFATQ9P243 1243 aa11.08□□□□□ -0.64
DDX4-209ENST00000509312 GPR182O15218 404 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 EGFRP00533 1210 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 MX2P20592 715 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 CCINQ13939 588 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 FAM182BQ5T319 152 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 TMC1Q8TDI8 760 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 IRF7Q92985 503 aa11.07□□□□□ -0.64
DDX4-209ENST00000509312 ASB16Q96NS5 453 aa11.06□□□□□ -0.64
DDX4-209ENST00000509312 TMEM63CQ9P1W3 806 aa11.06□□□□□ -0.64
DDX4-209ENST00000509312 PCSK2P16519 638 aa11.05□□□□□ -0.64
DDX4-209ENST00000509312 USP5P45974 858 aa11.05□□□□□ -0.64
DDX4-209ENST00000509312 BHMTQ93088 406 aa11.05□□□□□ -0.64
DDX4-209ENST00000509312 CITED4Q96RK1 184 aa11.05□□□□□ -0.64
DDX4-209ENST00000509312 ANKRD33BA6NCL7 494 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 BMP4P12644 408 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 NFKB1P19838 968 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 GMPRP36959 345 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 CNTNAP3BQ96NU0 1288 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 CNTNAP3Q9BZ76 1288 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 ELP3Q9H9T3 547 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 MBIPQ9NS73 344 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 KLF15Q9UIH9 416 aa11.04□□□□□ -0.64
DDX4-209ENST00000509312 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
DDX4-209ENST00000509312 WFS1O76024 890 aa11.03□□□□□ -0.64
DDX4-209ENST00000509312 LCE2AQ5TA79 106 aaPredicted RBP11.03□□□□□ -0.64
DDX4-209ENST00000509312 XKR5Q6UX68 686 aa11.03□□□□□ -0.64
DDX4-209ENST00000509312 ZNF438Q7Z4V0 828 aa11.03□□□□□ -0.64
DDX4-209ENST00000509312 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
DDX4-209ENST00000509312 C11orf16Q9NQ32 467 aa11.03□□□□□ -0.64
DDX4-209ENST00000509312 FOXD3Q9UJU5 478 aaPredicted RBP11.03□□□□□ -0.64
DDX4-209ENST00000509312 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.03□□□□□ -0.64
DDX4-209ENST00000509312 RPLP1P05386 114 aaKnown RBP11.02□□□□□ -0.65
DDX4-209ENST00000509312 PCBP4P57723 403 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms