RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 EP400Q96L91 3159 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 GRM8O00222 908 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 ZPR1O75312 459 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 RFC4P35249 363 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
RFC1-211ENST00000509084 GCKRQ14397 625 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
RFC1-211ENST00000509084 POTEHQ6S545 545 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 MEIS3Q99687 375 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 CWC25Q9NXE8 425 aaPredicted RBP13.03□□□□□ -0.32
RFC1-211ENST00000509084 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
RFC1-211ENST00000509084 UTYO14607 1347 aa13.03□□□□□ -0.32
RFC1-211ENST00000509084 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.32
RFC1-211ENST00000509084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
RFC1-211ENST00000509084 GNAI2P04899 355 aa13.02□□□□□ -0.33
RFC1-211ENST00000509084 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.33
RFC1-211ENST00000509084 PARP10Q53GL7 1025 aa13.02□□□□□ -0.33
RFC1-211ENST00000509084 USP44Q9H0E7 712 aa13.02□□□□□ -0.33
RFC1-211ENST00000509084 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
RFC1-211ENST00000509084 HLFQ16534 295 aa13.01□□□□□ -0.33
RFC1-211ENST00000509084 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
RFC1-211ENST00000509084 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
RFC1-211ENST00000509084 TFCP2L1Q9NZI6 479 aa13.01□□□□□ -0.33
RFC1-211ENST00000509084 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
RFC1-211ENST00000509084 PITPNM1O00562 1244 aa13□□□□□ -0.33
RFC1-211ENST00000509084 PHF14O94880 888 aa13□□□□□ -0.33
RFC1-211ENST00000509084 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
RFC1-211ENST00000509084 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
RFC1-211ENST00000509084 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
RFC1-211ENST00000509084 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
RFC1-211ENST00000509084 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
RFC1-211ENST00000509084 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
RFC1-211ENST00000509084 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
RFC1-211ENST00000509084 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
RFC1-211ENST00000509084 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
RFC1-211ENST00000509084 H7C1W4 665 aa12.98□□□□□ -0.33
RFC1-211ENST00000509084 HMMRO75330 724 aa12.98□□□□□ -0.33
RFC1-211ENST00000509084 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
RFC1-211ENST00000509084 NBPF7P0C2Y1 421 aaPredicted RBP12.98□□□□□ -0.33
RFC1-211ENST00000509084 GPTP24298 496 aa12.98□□□□□ -0.33
RFC1-211ENST00000509084 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
RFC1-211ENST00000509084 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
RFC1-211ENST00000509084 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
RFC1-211ENST00000509084 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
RFC1-211ENST00000509084 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
RFC1-211ENST00000509084 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
RFC1-211ENST00000509084 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 CEP85Q6P2H3 762 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
RFC1-211ENST00000509084 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 NYXQ9GZU5 481 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
RFC1-211ENST00000509084 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
RFC1-211ENST00000509084 LRRFIP2Q9Y608 721 aaKnown RBP12.97□□□□□ -0.33
RFC1-211ENST00000509084 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 CASP7P55210 303 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 MTX1Q13505 466 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
RFC1-211ENST00000509084 SETDB2Q96T68 719 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
RFC1-211ENST00000509084 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
RFC1-211ENST00000509084 LAMB2P55268 1798 aa12.96□□□□□ -0.34
RFC1-211ENST00000509084 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
RFC1-211ENST00000509084 SUCLG2Q96I99 432 aa12.95□□□□□ -0.34
RFC1-211ENST00000509084 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
RFC1-211ENST00000509084 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
RFC1-211ENST00000509084 TRMT112Q9UI30 125 aaKnown RBP12.95□□□□□ -0.34
RFC1-211ENST00000509084 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
RFC1-211ENST00000509084 GYS1P13807 737 aa12.94□□□□□ -0.34
RFC1-211ENST00000509084 ATP8B2P98198 1209 aa12.94□□□□□ -0.34
RFC1-211ENST00000509084 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
RFC1-211ENST00000509084 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
RFC1-211ENST00000509084 NLGN1Q8N2Q7 840 aa12.94□□□□□ -0.34
RFC1-211ENST00000509084 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
RFC1-211ENST00000509084 NTSR2O95665 410 aa12.93□□□□□ -0.34
RFC1-211ENST00000509084 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
RFC1-211ENST00000509084 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
RFC1-211ENST00000509084 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
RFC1-211ENST00000509084 BICC1Q9H694 974 aaKnown RBP12.93□□□□□ -0.34
RFC1-211ENST00000509084 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
RFC1-211ENST00000509084 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
RFC1-211ENST00000509084 SRGAP3O43295 1099 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 PDE8AO60658 829 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 TPTE2Q6XPS3 522 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 NBPF5PQ86XG9 351 aaPredicted RBP12.92□□□□□ -0.34
RFC1-211ENST00000509084 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
RFC1-211ENST00000509084 MYH3P11055 1940 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms