RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, human

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HTT-205	ENST00000509043	GSE1	Q14687	1217 aa		11.2	□□□□□ -0.62
HTT-205	ENST00000509043	RAB3GAP1	Q15042	981 aa		11.2	□□□□□ -0.62
HTT-205	ENST00000509043	CLEC17A	Q6ZS10	378 aa		11.2	□□□□□ -0.62
HTT-205	ENST00000509043	UNC5CL	Q8IV45	518 aa		11.2	□□□□□ -0.62
HTT-205	ENST00000509043	ISCA1	Q9BUE6	129 aa		11.2	□□□□□ -0.62
HTT-205	ENST00000509043	PA2G4	Q9UQ80	394 aa	Known RBP	11.2	□□□□□ -0.62
HTT-205	ENST00000509043	PHLPP1	O60346	1717 aa		11.2	□□□□□ -0.62
HTT-205	ENST00000509043	AK9	Q5TCS8	1911 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	SPATA31A1	Q5TZJ5	1347 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	A1BG	P04217	495 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	ATP5J	P18859	108 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	IL15	P40933	162 aa	Predicted RBP	11.19	□□□□□ -0.62
HTT-205	ENST00000509043	EPHA10	Q5JZY3	1008 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	BARGIN	Q6ZT62	677 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	EAF2	Q96CJ1	260 aa	Predicted RBP	11.19	□□□□□ -0.62
HTT-205	ENST00000509043	RBM42	Q9BTD8	480 aa	Known RBP	11.19	□□□□□ -0.62
HTT-205	ENST00000509043	PLA2G12B	Q9BX93	195 aa		11.19	□□□□□ -0.62
HTT-205	ENST00000509043	NRAP	Q86VF7	1730 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	CDHR2	Q9BYE9	1310 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	CIC	Q96RK0	1608 aa	Predicted RBP	11.18	□□□□□ -0.62
HTT-205	ENST00000509043	ERVV-1	B6SEH8	477 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	ATP5J2-PTCD1	G3V325	749 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	CD2BP2	O95400	341 aa	Known RBP	11.18	□□□□□ -0.62
HTT-205	ENST00000509043	PCCA	P05165	728 aa	Predicted RBP	11.18	□□□□□ -0.62
HTT-205	ENST00000509043	FOXO4	P98177	505 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	TNNI3K	Q59H18	835 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	TTLL7	Q6ZT98	887 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	INTS4	Q96HW7	963 aa	Known RBP	11.18	□□□□□ -0.62
HTT-205	ENST00000509043	FPGT-TNNI3K	V9GXZ4	949 aa		11.18	□□□□□ -0.62
HTT-205	ENST00000509043	MAP3K15	Q6ZN16	1313 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	ITGB4	P16144	1822 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	GOLGA6L22	H0YM25	854 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	NEK4	P51957	841 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.17	□□□□□ -0.62
HTT-205	ENST00000509043	LMBR1L	Q6UX01	489 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.17	□□□□□ -0.62
HTT-205	ENST00000509043	DNAJC10	Q8IXB1	793 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	SPRYD3	Q8NCJ5	442 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	KCNB2	Q92953	911 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	AK7	Q96M32	723 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	TM6SF1	Q9BZW5	370 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	LSG1	Q9H089	658 aa	Known RBP	11.17	□□□□□ -0.62
HTT-205	ENST00000509043	ASAP1	Q9ULH1	1129 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	TJP1	Q07157	1748 aa		11.17	□□□□□ -0.62
HTT-205	ENST00000509043	SPATA31A5	Q5VU36	1347 aa		11.16	□□□□□ -0.62
HTT-205	ENST00000509043	SPATA31A7	Q8IWB4	1347 aa		11.16	□□□□□ -0.62
HTT-205	ENST00000509043	SLIT2	O94813	1529 aa		11.16	□□□□□ -0.62
HTT-205	ENST00000509043	CYP19A1	P11511	503 aa	Predicted RBP	11.16	□□□□□ -0.62
HTT-205	ENST00000509043	IL6ST	P40189	918 aa	Predicted RBP	11.16	□□□□□ -0.62
HTT-205	ENST00000509043	PIP4K2A	P48426	406 aa	Predicted RBP	11.16	□□□□□ -0.62
HTT-205	ENST00000509043	CUL4A	Q13619	759 aa		11.16	□□□□□ -0.62
HTT-205	ENST00000509043	DDB1	Q16531	1140 aa		11.16	□□□□□ -0.62
HTT-205	ENST00000509043	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.16	□□□□□ -0.62
HTT-205	ENST00000509043	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
HTT-205	ENST00000509043	ZBTB3	Q9H5J0	574 aa		11.16	□□□□□ -0.62
HTT-205	ENST00000509043	EYA2	O00167	538 aa		11.15	□□□□□ -0.62
HTT-205	ENST00000509043	RGL2	O15211	777 aa		11.15	□□□□□ -0.62
HTT-205	ENST00000509043	HSP90B1	P14625	803 aa	Known RBP	11.15	□□□□□ -0.62
HTT-205	ENST00000509043	ZKSCAN1	P17029	563 aa	Predicted RBP	11.15	□□□□□ -0.62
HTT-205	ENST00000509043	KCNA4	P22459	653 aa		11.15	□□□□□ -0.62
HTT-205	ENST00000509043	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.15	□□□□□ -0.62
HTT-205	ENST00000509043	RNF20	Q5VTR2	975 aa		11.15	□□□□□ -0.62
HTT-205	ENST00000509043	SMARCC1	Q92922	1105 aa	Predicted RBP	11.15	□□□□□ -0.62
HTT-205	ENST00000509043	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.15	□□□□□ -0.62
HTT-205	ENST00000509043	SIL1	Q9H173	461 aa		11.15	□□□□□ -0.62
HTT-205	ENST00000509043	ISY1	Q9ULR0	285 aa	Known RBP	11.15	□□□□□ -0.62
HTT-205	ENST00000509043	AKAP2	Q9Y2D5	859 aa		11.15	□□□□□ -0.62
HTT-205	ENST00000509043	CSF1R	P07333	972 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	PDIA4	P13667	645 aa	Known RBP	11.14	□□□□□ -0.63
HTT-205	ENST00000509043	TFCP2	Q12800	502 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	CCDC57	Q2TAC2	916 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	CWC27	Q6UX04	472 aa	Known RBP	11.14	□□□□□ -0.63
HTT-205	ENST00000509043	TNPO1	Q92973	898 aa	Known RBP	11.14	□□□□□ -0.63
HTT-205	ENST00000509043	HAUS7	Q99871	368 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	FSD1	Q9BTV5	496 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	HMG20B	Q9P0W2	317 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	ABCC12	Q96J65	1359 aa		11.14	□□□□□ -0.63
HTT-205	ENST00000509043	CCDC171	Q6TFL3	1326 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	MAP4K4	O95819	1239 aa	Predicted RBP	11.13	□□□□□ -0.63
HTT-205	ENST00000509043	CYP2E1	P05181	493 aa	Predicted RBP	11.13	□□□□□ -0.63
HTT-205	ENST00000509043	PSMA5	P28066	241 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	ATG9A	Q7Z3C6	839 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	MAP4K1	Q92918	833 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	TMX3	Q96JJ7	454 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	DBNL	Q9UJU6	430 aa	Known RBP	11.13	□□□□□ -0.63
HTT-205	ENST00000509043	SPEF2	Q9C093	1822 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	ZNF831	Q5JPB2	1677 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	JCAD	Q9P266	1359 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	MED23	Q9ULK4	1368 aa		11.13	□□□□□ -0.63
HTT-205	ENST00000509043	DOT1L	Q8TEK3	1739 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	ZNF609	O15014	1411 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	KRT32	Q14532	448 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	TSGA10IP	Q3SY00	556 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	KLHDC4	Q8TBB5	520 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.12	□□□□□ -0.63
HTT-205	ENST00000509043	BOLA2	Q9H3K6	86 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	CEP126	Q9P2H0	1117 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	PALD1	Q9ULE6	856 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	CHMP3	Q9Y3E7	222 aa		11.12	□□□□□ -0.63
HTT-205	ENST00000509043	SNX14	Q9Y5W7	946 aa		11.12	□□□□□ -0.63

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