RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DEPDC4Q8N2C3 294 aa5.47□□□□□ -1.53
DEPDC1B-204ENST00000509006 SUSD3Q96L08 255 aa5.47□□□□□ -1.53
DEPDC1B-204ENST00000509006 PHACTR1Q9C0D0 580 aa5.47□□□□□ -1.53
DEPDC1B-204ENST00000509006 TSPAN10Q9H1Z9 355 aaPredicted RBP5.47□□□□□ -1.53
DEPDC1B-204ENST00000509006 COG6Q9Y2V7 657 aa5.47□□□□□ -1.53
DEPDC1B-204ENST00000509006 PSMA6P60900 246 aaKnown RBP5.46□□□□□ -1.54
DEPDC1B-204ENST00000509006 RNF112Q9ULX5 631 aa5.46□□□□□ -1.54
DEPDC1B-204ENST00000509006 KIAA1024Q9UPX6 916 aa5.46□□□□□ -1.54
DEPDC1B-204ENST00000509006 HIRAP54198 1017 aaPredicted RBP5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 C1orf53Q5VUE5 145 aa5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 ILDR2Q71H61 639 aa5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 TPCN2Q8NHX9 752 aa5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 ALG2Q9H553 416 aa5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 DNAJB12Q9NXW2 375 aaKnown RBP5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 ANKIB1Q9P2G1 1089 aa5.45□□□□□ -1.54
DEPDC1B-204ENST00000509006 USP17L5A8MUK1 530 aa5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 NOS3P29474 1203 aa5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 IREB2P48200 963 aaKnown RBP5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 POTEAQ6S8J7 498 aa5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 BTLAQ7Z6A9 289 aa5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 WFDC12Q8WWY7 111 aa5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 MEGF10Q96KG7 1140 aa5.44□□□□□ -1.54
DEPDC1B-204ENST00000509006 RGS9O75916 674 aaPredicted RBP5.43□□□□□ -1.54
DEPDC1B-204ENST00000509006 MSL1Q68DK7 614 aa5.43□□□□□ -1.54
DEPDC1B-204ENST00000509006 CHMP3Q9Y3E7 222 aa5.43□□□□□ -1.54
DEPDC1B-204ENST00000509006 LZTS3O60299 673 aaPredicted RBP5.42□□□□□ -1.54
DEPDC1B-204ENST00000509006 NFKB1P19838 968 aa5.42□□□□□ -1.54
DEPDC1B-204ENST00000509006 PLAURQ03405 335 aa5.42□□□□□ -1.54
DEPDC1B-204ENST00000509006 NFATC2IPQ8NCF5 419 aa5.42□□□□□ -1.54
DEPDC1B-204ENST00000509006 PCMTD2Q9NV79 361 aa5.42□□□□□ -1.54
DEPDC1B-204ENST00000509006 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.42□□□□□ -1.54
DEPDC1B-204ENST00000509006 ZBTB7BO15156 539 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 COBLO75128 1261 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 CPB1P15086 417 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 CLDN10P78369 228 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 GRIK5Q16478 980 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 CCDC102BQ68D86 513 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 PRR23CQ6ZRP0 262 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 FAM35AQ86V20 835 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 FBXO11Q86XK2 927 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 ALDH16A1Q8IZ83 802 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 POM121Q96HA1 1249 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 PNMA5Q96PV4 448 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 LPIN3Q9BQK8 851 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 GSX2Q9BZM3 304 aa5.41□□□□□ -1.54
DEPDC1B-204ENST00000509006 C21orf2O43822 256 aa5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 PPP1R12BO60237 982 aaPredicted RBP5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 SSTR4P31391 388 aa5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 DTWD1Q8N5C7 304 aa5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 TSEN2Q8NCE0 465 aaKnown RBP5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 ADAMTS19Q8TE59 1207 aa5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 NGLY1Q96IV0 654 aa5.4□□□□□ -1.54
DEPDC1B-204ENST00000509006 COL17A1Q9UMD9 1497 aaPredicted RBP5.39□□□□□ -1.55
DEPDC1B-204ENST00000509006 PAX4O43316 350 aa5.39□□□□□ -1.55
DEPDC1B-204ENST00000509006 FSTP19883 344 aa5.39□□□□□ -1.55
DEPDC1B-204ENST00000509006 PERM1Q5SV97 790 aa5.39□□□□□ -1.55
DEPDC1B-204ENST00000509006 TRIM50Q86XT4 487 aa5.39□□□□□ -1.55
DEPDC1B-204ENST00000509006 DEAF1O75398 565 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 PRKCSHP14314 528 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 GRNP28799 593 aaKnown RBP5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 MLLT1Q03111 559 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 CCINQ13939 588 aa5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 IGF2-ASQ6U949 168 aa5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 WFDC8Q8IUA0 241 aa5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 EFCC1Q9HA90 598 aa5.38□□□□□ -1.55
DEPDC1B-204ENST00000509006 USP17L3A6NCW0 530 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 USP17L4A6NCW7 530 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 POM121CA8CG34 1229 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 ZBTB42B2RXF5 422 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 ALX3O95076 343 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 CD97P48960 835 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 ATP1A2P50993 1020 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 USP17L2Q6R6M4 530 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 USP17L1Q7RTZ2 530 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 KRT25Q7Z3Z0 450 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 PLEKHM2Q8IWE5 1019 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 OGFOD1Q8N543 542 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 UCN2Q96RP3 112 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 C2orf49Q9BVC5 232 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 FRRS1LQ9P0K9 344 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 ZFATQ9P243 1243 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 BCS1LQ9Y276 419 aa5.37□□□□□ -1.55
DEPDC1B-204ENST00000509006 M0R2N6 131 aa5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 HIF1AQ16665 826 aa5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 ELMSAN1Q6PJG2 1045 aa5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 DZIP1LQ8IYY4 767 aaKnown RBP5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 CHMP7Q8WUX9 453 aaPredicted RBP5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 ZNF594Q96JF6 807 aaPredicted RBP5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 FMNL2Q96PY5 1086 aa5.36□□□□□ -1.55
DEPDC1B-204ENST00000509006 ATAD2Q6PL18 1390 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 TGFBR3LH3BV60 316 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 DLL1O00548 723 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 DKK1O94907 266 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 MED26O95402 600 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 TXKP42681 527 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 IRAK1P51617 712 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 IER5Q5VY09 327 aa5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 DHX32Q7L7V1 743 aaKnown RBP5.35□□□□□ -1.55
DEPDC1B-204ENST00000509006 SIX5Q8N196 739 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms