RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 FOXO4P98177 505 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
LDB2-211ENST00000508918 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
LDB2-211ENST00000508918 SALL3Q9BXA9 1300 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 BCORQ6W2J9 1755 aa16.78■□□□□ 0.28
LDB2-211ENST00000508918 PCCAP05165 728 aaPredicted RBP16.77■□□□□ 0.28
LDB2-211ENST00000508918 LMBR1LQ6UX01 489 aa16.77■□□□□ 0.28
LDB2-211ENST00000508918 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
LDB2-211ENST00000508918 NLRP10Q86W26 655 aa16.77■□□□□ 0.28
LDB2-211ENST00000508918 ERC1Q8IUD2 1116 aa16.77■□□□□ 0.28
LDB2-211ENST00000508918 CAMTA2O94983 1202 aa16.76■□□□□ 0.27
LDB2-211ENST00000508918 GSPT1P15170 499 aaKnown RBP16.76■□□□□ 0.27
LDB2-211ENST00000508918 PDE1AP54750 535 aa16.76■□□□□ 0.27
LDB2-211ENST00000508918 OSBPL3Q9H4L5 887 aa16.76■□□□□ 0.27
LDB2-211ENST00000508918 SEC24BO95487 1268 aa16.75■□□□□ 0.27
LDB2-211ENST00000508918 MX1P20591 662 aa16.75■□□□□ 0.27
LDB2-211ENST00000508918 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
LDB2-211ENST00000508918 G3BP1Q13283 466 aaKnown RBP eCLIP16.75■□□□□ 0.27
LDB2-211ENST00000508918 ZNF34Q8IZ26 560 aa16.75■□□□□ 0.27
LDB2-211ENST00000508918 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
LDB2-211ENST00000508918 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
LDB2-211ENST00000508918 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
LDB2-211ENST00000508918 FAM89AQ96GI7 184 aa16.74■□□□□ 0.27
LDB2-211ENST00000508918 SIL1Q9H173 461 aa16.74■□□□□ 0.27
LDB2-211ENST00000508918 COPRSQ9NQ92 184 aa16.74■□□□□ 0.27
LDB2-211ENST00000508918 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
LDB2-211ENST00000508918 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
LDB2-211ENST00000508918 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
LDB2-211ENST00000508918 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
LDB2-211ENST00000508918 NUTM1Q86Y26 1132 aa16.73■□□□□ 0.27
LDB2-211ENST00000508918 STAP2Q9UGK3 403 aa16.73■□□□□ 0.27
LDB2-211ENST00000508918 CHMP3Q9Y3E7 222 aa16.73■□□□□ 0.27
LDB2-211ENST00000508918 SASH1O94885 1247 aa16.73■□□□□ 0.27
LDB2-211ENST00000508918 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
LDB2-211ENST00000508918 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
LDB2-211ENST00000508918 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
LDB2-211ENST00000508918 SCN7AQ01118 1682 aa16.73■□□□□ 0.27
LDB2-211ENST00000508918 MYH3P11055 1940 aa16.72■□□□□ 0.27
LDB2-211ENST00000508918 C4BP0C0L5 1744 aa16.72■□□□□ 0.27
LDB2-211ENST00000508918 AOX1Q06278 1338 aa16.72■□□□□ 0.27
LDB2-211ENST00000508918 RPS6KA4O75676 772 aa16.72■□□□□ 0.27
LDB2-211ENST00000508918 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
LDB2-211ENST00000508918 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
LDB2-211ENST00000508918 CDC45O75419 566 aa16.71■□□□□ 0.27
LDB2-211ENST00000508918 SDSP20132 328 aa16.71■□□□□ 0.27
LDB2-211ENST00000508918 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
LDB2-211ENST00000508918 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
LDB2-211ENST00000508918 GNPATO15228 680 aa16.7■□□□□ 0.26
LDB2-211ENST00000508918 TRIM37O94972 964 aa16.7■□□□□ 0.26
LDB2-211ENST00000508918 RXRBP28702 533 aa16.7■□□□□ 0.26
LDB2-211ENST00000508918 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
LDB2-211ENST00000508918 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
LDB2-211ENST00000508918 TBC1D9Q6ZT07 1266 aa16.69■□□□□ 0.26
LDB2-211ENST00000508918 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
LDB2-211ENST00000508918 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
LDB2-211ENST00000508918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.69■□□□□ 0.26
LDB2-211ENST00000508918 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
LDB2-211ENST00000508918 CSF1RP07333 972 aa16.68■□□□□ 0.26
LDB2-211ENST00000508918 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
LDB2-211ENST00000508918 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
LDB2-211ENST00000508918 CLEC4GQ6UXB4 293 aa16.68■□□□□ 0.26
LDB2-211ENST00000508918 AACSQ86V21 672 aa16.68■□□□□ 0.26
LDB2-211ENST00000508918 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
LDB2-211ENST00000508918 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
LDB2-211ENST00000508918 USP42Q9H9J4 1324 aaKnown RBP16.68■□□□□ 0.26
LDB2-211ENST00000508918 RGL2O15211 777 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
LDB2-211ENST00000508918 LRRC4BQ9NT99 713 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 RTCBQ9Y3I0 505 aaKnown RBP16.67■□□□□ 0.26
LDB2-211ENST00000508918 LAMB2P55268 1798 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
LDB2-211ENST00000508918 AK9Q5TCS8 1911 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 PDE8AO60658 829 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 CTSWP56202 376 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 TFCP2Q12800 502 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 CCDC57Q2TAC2 916 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 PI4K2BQ8TCG2 481 aa16.67■□□□□ 0.26
LDB2-211ENST00000508918 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
LDB2-211ENST00000508918 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
LDB2-211ENST00000508918 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
LDB2-211ENST00000508918 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
LDB2-211ENST00000508918 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
LDB2-211ENST00000508918 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
LDB2-211ENST00000508918 GPATCH3Q96I76 525 aa16.66■□□□□ 0.26
LDB2-211ENST00000508918 AK7Q96M32 723 aa16.66■□□□□ 0.26
LDB2-211ENST00000508918 CCDC85AQ96PX6 553 aaPredicted RBP16.66■□□□□ 0.26
LDB2-211ENST00000508918 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
LDB2-211ENST00000508918 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
LDB2-211ENST00000508918 EYA2O00167 538 aa16.65■□□□□ 0.26
LDB2-211ENST00000508918 NTSR2O95665 410 aa16.65■□□□□ 0.26
LDB2-211ENST00000508918 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
LDB2-211ENST00000508918 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
LDB2-211ENST00000508918 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms