RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 NBPF15Q8N660 670 aa15.25■□□□□ 0.03
NEDD9-212ENST00000508800 PGAP2Q9UHJ9 254 aa15.25■□□□□ 0.03
NEDD9-212ENST00000508800 CRY2Q49AN0 593 aa15.24■□□□□ 0.03
NEDD9-212ENST00000508800 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
NEDD9-212ENST00000508800 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
NEDD9-212ENST00000508800 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
NEDD9-212ENST00000508800 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEDD9-212ENST00000508800 CDC37L1Q7L3B6 337 aa15.22■□□□□ 0.03
NEDD9-212ENST00000508800 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
NEDD9-212ENST00000508800 RIC1Q4ADV7 1423 aa15.22■□□□□ 0.03
NEDD9-212ENST00000508800 KIF7Q2M1P5 1343 aa15.21■□□□□ 0.03
NEDD9-212ENST00000508800 HMOX1P09601 288 aa15.21■□□□□ 0.03
NEDD9-212ENST00000508800 HUNKP57058 714 aa15.21■□□□□ 0.03
NEDD9-212ENST00000508800 CTU1Q7Z7A3 348 aaKnown RBP15.21■□□□□ 0.03
NEDD9-212ENST00000508800 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
NEDD9-212ENST00000508800 GNAT3A8MTJ3 354 aa15.2■□□□□ 0.02
NEDD9-212ENST00000508800 HOXA10P31260 410 aaPredicted RBP15.2■□□□□ 0.02
NEDD9-212ENST00000508800 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
NEDD9-212ENST00000508800 PANK3Q9H999 370 aa15.2■□□□□ 0.02
NEDD9-212ENST00000508800 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
NEDD9-212ENST00000508800 PKN2Q16513 984 aaKnown RBP15.19■□□□□ 0.02
NEDD9-212ENST00000508800 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
NEDD9-212ENST00000508800 RPGRQ92834 1020 aaKnown RBP15.19■□□□□ 0.02
NEDD9-212ENST00000508800 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
NEDD9-212ENST00000508800 TMX4Q9H1E5 349 aaPredicted RBP15.19■□□□□ 0.02
NEDD9-212ENST00000508800 NPC1L1Q9UHC9 1359 aa15.19■□□□□ 0.02
NEDD9-212ENST00000508800 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
NEDD9-212ENST00000508800 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
NEDD9-212ENST00000508800 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
NEDD9-212ENST00000508800 CEMIPQ8WUJ3 1361 aa15.17■□□□□ 0.02
NEDD9-212ENST00000508800 IBTKQ9P2D0 1353 aaPredicted RBP15.17■□□□□ 0.02
NEDD9-212ENST00000508800 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
NEDD9-212ENST00000508800 SUPT20HQ8NEM7 779 aa15.17■□□□□ 0.02
NEDD9-212ENST00000508800 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
NEDD9-212ENST00000508800 CRAMP1Q96RY5 1269 aa15.17■□□□□ 0.02
NEDD9-212ENST00000508800 ZIC5Q96T25 663 aa15.17■□□□□ 0.02
NEDD9-212ENST00000508800 ZNRF3Q9ULT6 936 aa15.17■□□□□ 0.02
NEDD9-212ENST00000508800 MKI67P46013 3256 aaKnown RBP15.16■□□□□ 0.02
NEDD9-212ENST00000508800 CUL9Q8IWT3 2517 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 CEP290O15078 2479 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 FAM155AB1AL88 458 aaPredicted RBP15.16■□□□□ 0.02
NEDD9-212ENST00000508800 TRPA1O75762 1119 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 CXCL9Q07325 125 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 TNIP1Q15025 636 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
NEDD9-212ENST00000508800 RNF186Q9NXI6 227 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 KNSTRNQ9Y448 316 aa15.16■□□□□ 0.02
NEDD9-212ENST00000508800 ABCC12Q96J65 1359 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 FAM177BA6PVY3 158 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 BTBD11A6QL63 1104 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
NEDD9-212ENST00000508800 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
NEDD9-212ENST00000508800 SNRPA1P09661 255 aaKnown RBP15.15■□□□□ 0.02
NEDD9-212ENST00000508800 C2orf69Q8N8R5 385 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 HPS5Q9UPZ3 1129 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 NUP98P52948 1817 aa15.15■□□□□ 0.02
NEDD9-212ENST00000508800 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
NEDD9-212ENST00000508800 AOC3Q16853 763 aa15.14■□□□□ 0.01
NEDD9-212ENST00000508800 HABP4Q5JVS0 413 aaKnown RBP15.14■□□□□ 0.01
NEDD9-212ENST00000508800 GBA2Q9HCG7 927 aaPredicted RBP15.14■□□□□ 0.01
NEDD9-212ENST00000508800 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
NEDD9-212ENST00000508800 H7C1D1 291 aa15.13■□□□□ 0.01
NEDD9-212ENST00000508800 ZNF157P51786 506 aaPredicted RBP15.13■□□□□ 0.01
NEDD9-212ENST00000508800 PIP4K2AP48426 406 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-212ENST00000508800 HIRAP54198 1017 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-212ENST00000508800 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-212ENST00000508800 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
NEDD9-212ENST00000508800 KIAA0100Q14667 2235 aaKnown RBP15.11■□□□□ 0.01
NEDD9-212ENST00000508800 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
NEDD9-212ENST00000508800 SLC10A3P09131 477 aa15.11■□□□□ 0.01
NEDD9-212ENST00000508800 KRT26Q7Z3Y9 468 aa15.11■□□□□ 0.01
NEDD9-212ENST00000508800 USP48Q86UV5 1035 aa15.11■□□□□ 0.01
NEDD9-212ENST00000508800 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
NEDD9-212ENST00000508800 LAMB4A4D0S4 1761 aa15.11■□□□□ 0.01
NEDD9-212ENST00000508800 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
NEDD9-212ENST00000508800 HLFQ16534 295 aa15.1■□□□□ 0.01
NEDD9-212ENST00000508800 NUTM1Q86Y26 1132 aa15.1■□□□□ 0.01
NEDD9-212ENST00000508800 CNOT7Q9UIV1 285 aaKnown RBP15.1■□□□□ 0.01
NEDD9-212ENST00000508800 HDAC9Q9UKV0 1011 aa15.1■□□□□ 0.01
NEDD9-212ENST00000508800 TRIOBPQ9H2D6 2365 aa15.09■□□□□ 0.01
NEDD9-212ENST00000508800 NBPF26B4DH59 902 aa15.09■□□□□ 0.01
NEDD9-212ENST00000508800 KCNQ3O43525 872 aa15.09■□□□□ 0.01
NEDD9-212ENST00000508800 NBPF10Q6P3W6 841 aaKnown RBP15.09■□□□□ 0.01
NEDD9-212ENST00000508800 DPF2Q92785 391 aa15.09■□□□□ 0.01
NEDD9-212ENST00000508800 CSRNP1Q96S65 589 aa15.09■□□□□ 0.01
NEDD9-212ENST00000508800 TIMELESSQ9UNS1 1208 aa15.09■□□□□ 0.01
NEDD9-212ENST00000508800 NOM1Q5C9Z4 860 aaKnown RBP15.08■□□□□ 0
NEDD9-212ENST00000508800 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0
NEDD9-212ENST00000508800 MICALL2Q8IY33 904 aa15.08■□□□□ 0
NEDD9-212ENST00000508800 DCPSQ96C86 337 aaKnown RBP15.08■□□□□ 0
NEDD9-212ENST00000508800 HTTP42858 3142 aa15.08■□□□□ 0
NEDD9-212ENST00000508800 FBXO46Q6PJ61 603 aaPredicted RBP15.07■□□□□ 0
NEDD9-212ENST00000508800 PRAMEF22A3QJZ6 481 aa15.06■□□□□ 0
NEDD9-212ENST00000508800 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
NEDD9-212ENST00000508800 RAD17O75943 681 aa15.06■□□□□ 0
NEDD9-212ENST00000508800 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
NEDD9-212ENST00000508800 NLRP3Q96P20 1036 aa15.06■□□□□ 0
NEDD9-212ENST00000508800 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms