RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 NFE2L2Q16236 605 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 TMCO5BA8MYB1 307 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
KLHL3-209ENST00000508657 ABL1P00519 1130 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 TPTE2Q6XPS3 522 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 FKBP15Q5T1M5 1219 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
KLHL3-209ENST00000508657 SLC26A6Q9BXS9 759 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 MFSD6Q6ZSS7 791 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 RNF34Q969K3 372 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 UFL1O94874 794 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 MYCLP12524 364 aaPredicted RBP10.38□□□□□ -0.75
KLHL3-209ENST00000508657 TSHZ3Q63HK5 1081 aa10.38□□□□□ -0.75
KLHL3-209ENST00000508657 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
KLHL3-209ENST00000508657 STX6O43752 255 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 CCDC91Q7Z6B0 441 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 HAUS7Q99871 368 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 CEP83Q9Y592 693 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 FAM170AA1A519 330 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 CFAP100Q494V2 611 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 GADL1Q6ZQY3 521 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 FILIP1Q7Z7B0 1213 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 PTPDC1A2A3K4 754 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 FAM182BQ5T319 152 aa10.37□□□□□ -0.75
KLHL3-209ENST00000508657 NAA16Q6N069 864 aaPredicted RBP10.37□□□□□ -0.75
KLHL3-209ENST00000508657 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
KLHL3-209ENST00000508657 APBB1IPQ7Z5R6 666 aaPredicted RBP10.37□□□□□ -0.75
KLHL3-209ENST00000508657 TRIM6Q9C030 488 aaPredicted RBP10.37□□□□□ -0.75
KLHL3-209ENST00000508657 MTIF2P46199 727 aaKnown RBP10.36□□□□□ -0.75
KLHL3-209ENST00000508657 MAEAQ7L5Y9 396 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 CNBD1Q8NA66 436 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 DNAAF4Q8WXU2 420 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 TEX13AQ9BXU3 409 aaPredicted RBP10.36□□□□□ -0.75
KLHL3-209ENST00000508657 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 CHMP2AO43633 222 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 SPA17Q15506 151 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 C8orf76Q96K31 380 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 NYXQ9GZU5 481 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 KRT85P78386 507 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 CPXCR1Q8N123 301 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 RNF41Q9H4P4 317 aaPredicted RBP10.36□□□□□ -0.75
KLHL3-209ENST00000508657 FAM83GA6ND36 823 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 NOP56O00567 594 aaKnown RBP10.36□□□□□ -0.75
KLHL3-209ENST00000508657 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 TSNARE1Q96NA8 513 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 ZRANB1Q9UGI0 708 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 CETN1Q12798 172 aa10.36□□□□□ -0.75
KLHL3-209ENST00000508657 EPRSP07814 1512 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 STAMBPO95630 424 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 GABPAQ06546 454 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 EYA3Q99504 573 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 IFIT1BQ5T764 474 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 DDX23Q9BUQ8 820 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 WDR7Q9Y4E6 1490 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 NDC80O14777 642 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 AEBP1Q8IUX7 1158 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 NIM1KQ8IY84 436 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 NPHP3Q7Z494 1330 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 B4DLN1 442 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 TOP2AP11388 1531 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 IL2RBP14784 551 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 MRPL12P52815 198 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 MVPQ14764 893 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 UPF3BQ9BZI7 483 aaKnown RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 CCDC87Q9NVE4 849 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 IFRD2Q12894 506 aaPredicted RBP10.35□□□□□ -0.75
KLHL3-209ENST00000508657 KIF1BPQ96EK5 621 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
KLHL3-209ENST00000508657 CCDC196A0A1B0GTZ2 297 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 BRDTQ58F21 947 aaPredicted RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 GCC1Q96CN9 775 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 TCP11L1Q9NUJ3 509 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 MCM9Q9NXL9 1143 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 BIN1O00499 593 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 SNRPA1P09661 255 aaKnown RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 ACEP12821 1306 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 H7C1D1 291 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 WASLO00401 505 aaPredicted RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 RBM25P49756 843 aaKnown RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 LRRC2Q9BYS8 371 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 C9orf84Q5VXU9 1444 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 NASPP49321 788 aaPredicted RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 NAPAP54920 295 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 IRX3P78415 501 aaPredicted RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 PPP2R5CQ13362 524 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 TXLNBQ8N3L3 684 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 PLIN2Q99541 437 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 FERMT1Q9BQL6 677 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 SPDYE3A6NKU9 549 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 EEF2P13639 858 aaKnown RBP10.34□□□□□ -0.75
KLHL3-209ENST00000508657 VPS36Q86VN1 386 aa10.34□□□□□ -0.75
KLHL3-209ENST00000508657 MAP2K1Q02750 393 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms