RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
NUP54-207ENST00000508583 PXDNLA1KZ92 1463 aa11.63□□□□□ -0.55
NUP54-207ENST00000508583 UBN2Q6ZU65 1347 aa11.62□□□□□ -0.55
NUP54-207ENST00000508583 SH3TC1Q8TE82 1336 aa11.62□□□□□ -0.55
NUP54-207ENST00000508583 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
NUP54-207ENST00000508583 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
NUP54-207ENST00000508583 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
NUP54-207ENST00000508583 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
NUP54-207ENST00000508583 ISCA1Q9BUE6 129 aa11.62□□□□□ -0.55
NUP54-207ENST00000508583 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
NUP54-207ENST00000508583 TRMT112Q9UI30 125 aaKnown RBP11.62□□□□□ -0.55
NUP54-207ENST00000508583 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
NUP54-207ENST00000508583 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
NUP54-207ENST00000508583 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 NTSR2O95665 410 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 GPR162Q16538 588 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 SUSD4Q5VX71 490 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 ZBTB38Q8NAP3 1195 aaPredicted RBP11.61□□□□□ -0.55
NUP54-207ENST00000508583 SSH1Q8WYL5 1049 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 MYD88Q99836 296 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 ADCY9O60503 1353 aa11.61□□□□□ -0.55
NUP54-207ENST00000508583 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
NUP54-207ENST00000508583 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 ATP5J2-PTCD1G3V325 749 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
NUP54-207ENST00000508583 G2E3Q7L622 706 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 C2CD5Q86YS7 1000 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
NUP54-207ENST00000508583 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 CNKSR1Q969H4 720 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 NLRP3Q96P20 1036 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 WWC3Q9ULE0 1092 aa11.6□□□□□ -0.55
NUP54-207ENST00000508583 TNRC6CQ9HCJ0 1690 aaKnown RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
NUP54-207ENST00000508583 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 NPR1P16066 1061 aa11.59□□□□□ -0.55
NUP54-207ENST00000508583 DPEP1P16444 411 aa11.59□□□□□ -0.55
NUP54-207ENST00000508583 RARSP54136 660 aaKnown RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
NUP54-207ENST00000508583 DALRD3Q5D0E6 543 aaKnown RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
NUP54-207ENST00000508583 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
NUP54-207ENST00000508583 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 RPGRQ92834 1020 aaKnown RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
NUP54-207ENST00000508583 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
NUP54-207ENST00000508583 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
NUP54-207ENST00000508583 SLC10A5Q5PT55 438 aa11.58□□□□□ -0.56
NUP54-207ENST00000508583 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
NUP54-207ENST00000508583 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
NUP54-207ENST00000508583 ARHGAP45Q92619 1136 aa11.58□□□□□ -0.56
NUP54-207ENST00000508583 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
NUP54-207ENST00000508583 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 ALDH1L1O75891 902 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 SRGNP10124 158 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 CHRNA5P30532 468 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 CRY2Q49AN0 593 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 ZNF622Q969S3 477 aaKnown RBP eCLIP11.57□□□□□ -0.56
NUP54-207ENST00000508583 RBM17Q96I25 401 aaKnown RBP11.57□□□□□ -0.56
NUP54-207ENST00000508583 SRCIN1Q9C0H9 1055 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 TMX4Q9H1E5 349 aaPredicted RBP11.57□□□□□ -0.56
NUP54-207ENST00000508583 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
NUP54-207ENST00000508583 UTRNP46939 3433 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
NUP54-207ENST00000508583 IRS4O14654 1257 aaPredicted RBP11.56□□□□□ -0.56
NUP54-207ENST00000508583 IGKV5-2P06315 115 aa11.56□□□□□ -0.56
NUP54-207ENST00000508583 YBX3P16989 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP54-207ENST00000508583 GCKRQ14397 625 aa11.56□□□□□ -0.56
NUP54-207ENST00000508583 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
NUP54-207ENST00000508583 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
NUP54-207ENST00000508583 LAMB2P55268 1798 aa11.56□□□□□ -0.56
NUP54-207ENST00000508583 CDHR2Q9BYE9 1310 aa11.56□□□□□ -0.56
NUP54-207ENST00000508583 F6X3S4 739 aa11.55□□□□□ -0.56
NUP54-207ENST00000508583 KCNA3P22001 575 aa11.55□□□□□ -0.56
NUP54-207ENST00000508583 CCT4P50991 539 aaKnown RBP11.55□□□□□ -0.56
NUP54-207ENST00000508583 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
NUP54-207ENST00000508583 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
NUP54-207ENST00000508583 BEND3Q5T5X7 828 aa11.55□□□□□ -0.56
NUP54-207ENST00000508583 DDX46Q7L014 1031 aaKnown RBP11.55□□□□□ -0.56
NUP54-207ENST00000508583 YTHDC1Q96MU7 727 aaKnown RBP11.55□□□□□ -0.56
NUP54-207ENST00000508583 C9orf78Q9NZ63 289 aaPredicted RBP11.55□□□□□ -0.56
NUP54-207ENST00000508583 ARFGEF1Q9Y6D6 1849 aa11.55□□□□□ -0.56
NUP54-207ENST00000508583 GRM8O00222 908 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 PDE8AO60658 829 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 MS4A1P11836 297 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 HCLS1P14317 486 aaPredicted RBP11.54□□□□□ -0.56
NUP54-207ENST00000508583 HOXA10P31260 410 aaPredicted RBP11.54□□□□□ -0.56
NUP54-207ENST00000508583 CCDC152Q4G0S7 254 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 ATF7IPQ6VMQ6 1270 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 TMC4Q7Z404 712 aa11.54□□□□□ -0.56
NUP54-207ENST00000508583 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms