RNA–Protein interactions for RNA: ENST00000508434.1

C1QTNF3-204, Transcript of C1q and TNF related 3, humanhuman

TSL 2

Gene C1QTNF3, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-204ENST00000508434 AIMP1Q12904 312 aaKnown RBP21.98■■□□□ 1.11
C1QTNF3-204ENST00000508434 CC2D2BQ6DHV5 1058 aa21.98■■□□□ 1.11
C1QTNF3-204ENST00000508434 SMC1BQ8NDV3 1235 aa21.98■■□□□ 1.11
C1QTNF3-204ENST00000508434 RPGRQ92834 1020 aaKnown RBP21.98■■□□□ 1.11
C1QTNF3-204ENST00000508434 CCDC88AQ3V6T2 1871 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 HDGFL1Q5TGJ6 251 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 RBM17Q96I25 401 aaKnown RBP21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 NLRP3Q96P20 1036 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 CRAMP1Q96RY5 1269 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 MBIPQ9NS73 344 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 CHPF2Q9P2E5 772 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 RNF123Q5XPI4 1314 aa21.97■■□□□ 1.11
C1QTNF3-204ENST00000508434 POTECB2RU33 542 aa21.96■■□□□ 1.11
C1QTNF3-204ENST00000508434 TCIRG1Q13488 830 aa21.96■■□□□ 1.11
C1QTNF3-204ENST00000508434 GRIPAP1Q4V328 841 aa21.96■■□□□ 1.11
C1QTNF3-204ENST00000508434 IFT57Q9NWB7 429 aa21.96■■□□□ 1.11
C1QTNF3-204ENST00000508434 DBF4Q9UBU7 674 aaPredicted RBP21.96■■□□□ 1.11
C1QTNF3-204ENST00000508434 TIAM2Q8IVF5 1701 aa21.96■■□□□ 1.11
C1QTNF3-204ENST00000508434 GNAI1P63096 354 aa21.95■■□□□ 1.1
C1QTNF3-204ENST00000508434 DUSP27Q5VZP5 1158 aa21.95■■□□□ 1.1
C1QTNF3-204ENST00000508434 OLFM4Q6UX06 510 aa21.95■■□□□ 1.1
C1QTNF3-204ENST00000508434 DICER1Q9UPY3 1922 aaKnown RBP21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 PLBD2Q8NHP8 589 aa21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 PSMD1Q99460 953 aa21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 ZNF277Q9NRM2 450 aaPredicted RBP21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 CACNA1SQ13698 1873 aa21.94■■□□□ 1.1
C1QTNF3-204ENST00000508434 DDNO94850 711 aaPredicted RBP21.93■■□□□ 1.1
C1QTNF3-204ENST00000508434 ANKRD13DQ6ZTN6 518 aa21.93■■□□□ 1.1
C1QTNF3-204ENST00000508434 WDR90Q96KV7 1748 aa21.93■■□□□ 1.1
C1QTNF3-204ENST00000508434 HYPKQ9NX55 129 aa21.93■■□□□ 1.1
C1QTNF3-204ENST00000508434 C3orf67Q6ZVT6 689 aa21.92■■□□□ 1.1
C1QTNF3-204ENST00000508434 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
C1QTNF3-204ENST00000508434 IARSP41252 1262 aaKnown RBP21.91■■□□□ 1.1
C1QTNF3-204ENST00000508434 DNAJC5GQ8N7S2 189 aa21.91■■□□□ 1.1
C1QTNF3-204ENST00000508434 TRMT112Q9UI30 125 aaKnown RBP21.91■■□□□ 1.1
C1QTNF3-204ENST00000508434 SNED1Q8TER0 1413 aa21.9■■□□□ 1.1
C1QTNF3-204ENST00000508434 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
C1QTNF3-204ENST00000508434 CHMP4AQ9BY43 222 aa21.9■■□□□ 1.1
C1QTNF3-204ENST00000508434 SH3TC1Q8TE82 1336 aa21.89■■□□□ 1.1
C1QTNF3-204ENST00000508434 PPEF1O14829 653 aaPredicted RBP21.89■■□□□ 1.09
C1QTNF3-204ENST00000508434 L3MBTL3Q96JM7 780 aaPredicted RBP21.89■■□□□ 1.09
C1QTNF3-204ENST00000508434 TMX4Q9H1E5 349 aaPredicted RBP21.89■■□□□ 1.09
C1QTNF3-204ENST00000508434 IQCA1LA6NCM1 817 aa21.88■■□□□ 1.09
C1QTNF3-204ENST00000508434 FZD9O00144 591 aa21.88■■□□□ 1.09
C1QTNF3-204ENST00000508434 JDP2Q8WYK2 163 aa21.88■■□□□ 1.09
C1QTNF3-204ENST00000508434 ISCA1Q9BUE6 129 aa21.88■■□□□ 1.09
C1QTNF3-204ENST00000508434 CEP350Q5VT06 3117 aa21.88■■□□□ 1.09
C1QTNF3-204ENST00000508434 BBOX1O75936 387 aa21.87■■□□□ 1.09
C1QTNF3-204ENST00000508434 HCLS1P14317 486 aaPredicted RBP21.87■■□□□ 1.09
C1QTNF3-204ENST00000508434 CCDC27Q2M243 656 aa21.87■■□□□ 1.09
C1QTNF3-204ENST00000508434 ATP6V0A2Q9Y487 856 aa21.87■■□□□ 1.09
C1QTNF3-204ENST00000508434 ANP32CO43423 234 aa21.86■■□□□ 1.09
C1QTNF3-204ENST00000508434 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
C1QTNF3-204ENST00000508434 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
C1QTNF3-204ENST00000508434 ELL2O00472 640 aaPredicted RBP21.85■■□□□ 1.09
C1QTNF3-204ENST00000508434 TCERG1O14776 1098 aaKnown RBP21.85■■□□□ 1.09
C1QTNF3-204ENST00000508434 VPS33BQ9H267 617 aa21.85■■□□□ 1.09
C1QTNF3-204ENST00000508434 ABCC4O15439 1325 aa21.84■■□□□ 1.09
C1QTNF3-204ENST00000508434 ZNF541Q9H0D2 1346 aa21.84■■□□□ 1.09
C1QTNF3-204ENST00000508434 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
C1QTNF3-204ENST00000508434 SP8Q8IXZ3 490 aa21.84■■□□□ 1.09
C1QTNF3-204ENST00000508434 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
C1QTNF3-204ENST00000508434 ANKRD36CQ5JPF3 1778 aa21.84■■□□□ 1.09
C1QTNF3-204ENST00000508434 ATP5J2-PTCD1G3V325 749 aa21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 CCDC30Q5VVM6 783 aa21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 CHADLQ6NUI6 762 aa21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 RIC3Q7Z5B4 369 aa21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 GPC2Q8N158 579 aa21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 TAF1DQ9H5J8 278 aaPredicted RBP21.83■■□□□ 1.09
C1QTNF3-204ENST00000508434 EIF6P56537 245 aaKnown RBP21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 HTRA3P83110 453 aa21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 GRAPQ13588 217 aa21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 WWC1Q8IX03 1113 aa21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 LARGE2Q8N3Y3 721 aa21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 GRAPLQ8TC17 118 aaPredicted RBP21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 KLRG1Q96E93 195 aa21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 PHAXQ9H814 394 aaKnown RBP21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 MRS2Q9HD23 443 aa21.82■■□□□ 1.08
C1QTNF3-204ENST00000508434 TMC4Q7Z404 712 aa21.81■■□□□ 1.08
C1QTNF3-204ENST00000508434 SUPT20HQ8NEM7 779 aa21.81■■□□□ 1.08
C1QTNF3-204ENST00000508434 FAM89AQ96GI7 184 aa21.81■■□□□ 1.08
C1QTNF3-204ENST00000508434 HACL1Q9UJ83 578 aa21.81■■□□□ 1.08
C1QTNF3-204ENST00000508434 SF3B3Q15393 1217 aaKnown RBP21.8■■□□□ 1.08
C1QTNF3-204ENST00000508434 LDHDQ86WU2 507 aa21.8■■□□□ 1.08
C1QTNF3-204ENST00000508434 RTFDC1Q9BY42 306 aaPredicted RBP21.8■■□□□ 1.08
C1QTNF3-204ENST00000508434 SLC51AQ86UW1 340 aa21.79■■□□□ 1.08
C1QTNF3-204ENST00000508434 IL16Q14005 1332 aa21.79■■□□□ 1.08
C1QTNF3-204ENST00000508434 DDX58O95786 925 aaKnown RBP21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 POTEIP0CG38 1075 aa21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 POTEJP0CG39 1038 aa21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 DPP8Q6V1X1 898 aaPredicted RBP21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 PNMA8AQ86V59 439 aaPredicted RBP21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 NIM1KQ8IY84 436 aa21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 MPNDQ8N594 471 aa21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 SCN4AP35499 1836 aa21.78■■□□□ 1.08
C1QTNF3-204ENST00000508434 IRS4O14654 1257 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms