RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 NPR1P16066 1061 aa17.75■□□□□ 0.43
SGCA-206ENST00000508382 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
SGCA-206ENST00000508382 CIAPIN1Q6FI81 312 aa17.75■□□□□ 0.43
SGCA-206ENST00000508382 SLC51AQ86UW1 340 aa17.75■□□□□ 0.43
SGCA-206ENST00000508382 ZNF496Q96IT1 587 aaPredicted RBP17.75■□□□□ 0.43
SGCA-206ENST00000508382 CA12O43570 354 aa17.74■□□□□ 0.43
SGCA-206ENST00000508382 IL6STP40189 918 aaPredicted RBP17.74■□□□□ 0.43
SGCA-206ENST00000508382 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
SGCA-206ENST00000508382 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
SGCA-206ENST00000508382 NPHP1O15259 732 aa17.73■□□□□ 0.43
SGCA-206ENST00000508382 NUDCQ9Y266 331 aa17.73■□□□□ 0.43
SGCA-206ENST00000508382 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
SGCA-206ENST00000508382 CELF2O95319 508 aaKnown RBP17.7■□□□□ 0.42
SGCA-206ENST00000508382 LMOD1P29536 600 aaPredicted RBP17.7■□□□□ 0.42
SGCA-206ENST00000508382 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
SGCA-206ENST00000508382 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
SGCA-206ENST00000508382 USP50Q70EL3 339 aaPredicted RBP17.7■□□□□ 0.42
SGCA-206ENST00000508382 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
SGCA-206ENST00000508382 PSMD1Q99460 953 aa17.7■□□□□ 0.42
SGCA-206ENST00000508382 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
SGCA-206ENST00000508382 DZIP3Q86Y13 1208 aaKnown RBP17.69■□□□□ 0.42
SGCA-206ENST00000508382 HHIPL1Q96JK4 782 aa17.69■□□□□ 0.42
SGCA-206ENST00000508382 GLIS2Q9BZE0 524 aaPredicted RBP17.69■□□□□ 0.42
SGCA-206ENST00000508382 ADAMTS8Q9UP79 889 aa17.69■□□□□ 0.42
SGCA-206ENST00000508382 AKAP11Q9UKA4 1901 aa17.68■□□□□ 0.42
SGCA-206ENST00000508382 HMOX1P09601 288 aa17.68■□□□□ 0.42
SGCA-206ENST00000508382 TTC5Q8N0Z6 440 aa17.68■□□□□ 0.42
SGCA-206ENST00000508382 JDP2Q8WYK2 163 aa17.68■□□□□ 0.42
SGCA-206ENST00000508382 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
SGCA-206ENST00000508382 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
SGCA-206ENST00000508382 POLR2AP24928 1970 aaKnown RBP17.67■□□□□ 0.42
SGCA-206ENST00000508382 KCNQ3O43525 872 aa17.66■□□□□ 0.42
SGCA-206ENST00000508382 FAM177BA6PVY3 158 aa17.65■□□□□ 0.42
SGCA-206ENST00000508382 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
SGCA-206ENST00000508382 IL17REQ8NFR9 667 aa17.65■□□□□ 0.42
SGCA-206ENST00000508382 TEX13AQ9BXU3 409 aaPredicted RBP17.65■□□□□ 0.42
SGCA-206ENST00000508382 PRAMEF22A3QJZ6 481 aa17.64■□□□□ 0.41
SGCA-206ENST00000508382 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
SGCA-206ENST00000508382 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
SGCA-206ENST00000508382 PGAP2Q9UHJ9 254 aa17.64■□□□□ 0.41
SGCA-206ENST00000508382 ABCC12Q96J65 1359 aa17.64■□□□□ 0.41
SGCA-206ENST00000508382 ALDH1B1P30837 517 aa17.63■□□□□ 0.41
SGCA-206ENST00000508382 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
SGCA-206ENST00000508382 CLEC4GQ6UXB4 293 aa17.63■□□□□ 0.41
SGCA-206ENST00000508382 ZNF408Q9H9D4 720 aa17.63■□□□□ 0.41
SGCA-206ENST00000508382 ADARB2Q9NS39 739 aaKnown RBP17.63■□□□□ 0.41
SGCA-206ENST00000508382 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
SGCA-206ENST00000508382 USP16Q9Y5T5 823 aa17.63■□□□□ 0.41
SGCA-206ENST00000508382 NUP98P52948 1817 aa17.63■□□□□ 0.41
SGCA-206ENST00000508382 FAM155AB1AL88 458 aaPredicted RBP17.62■□□□□ 0.41
SGCA-206ENST00000508382 NOGQ13253 232 aa17.62■□□□□ 0.41
SGCA-206ENST00000508382 LARGE2Q8N3Y3 721 aa17.62■□□□□ 0.41
SGCA-206ENST00000508382 NIP7Q9Y221 180 aaKnown RBP eCLIP17.62■□□□□ 0.41
SGCA-206ENST00000508382 CRY2Q49AN0 593 aa17.61■□□□□ 0.41
SGCA-206ENST00000508382 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
SGCA-206ENST00000508382 MKI67P46013 3256 aaKnown RBP17.6■□□□□ 0.41
SGCA-206ENST00000508382 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
SGCA-206ENST00000508382 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
SGCA-206ENST00000508382 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
SGCA-206ENST00000508382 SHTN1A0MZ66 631 aa17.59■□□□□ 0.41
SGCA-206ENST00000508382 HLFQ16534 295 aa17.59■□□□□ 0.41
SGCA-206ENST00000508382 TRPM4Q8TD43 1214 aa17.59■□□□□ 0.41
SGCA-206ENST00000508382 RNF186Q9NXI6 227 aa17.59■□□□□ 0.41
SGCA-206ENST00000508382 NBPF26B4DH59 902 aa17.58■□□□□ 0.4
SGCA-206ENST00000508382 GMPSP49915 693 aaPredicted RBP17.58■□□□□ 0.4
SGCA-206ENST00000508382 HUNKP57058 714 aa17.58■□□□□ 0.4
SGCA-206ENST00000508382 CXCL9Q07325 125 aa17.58■□□□□ 0.4
SGCA-206ENST00000508382 NBPF10Q6P3W6 841 aaKnown RBP17.58■□□□□ 0.4
SGCA-206ENST00000508382 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
SGCA-206ENST00000508382 NBPF15Q8N660 670 aa17.58■□□□□ 0.4
SGCA-206ENST00000508382 SAGE1Q9NXZ1 904 aa17.58■□□□□ 0.4
SGCA-206ENST00000508382 RIC1Q4ADV7 1423 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 TRPA1O75762 1119 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 KIF23Q02241 960 aaPredicted RBP17.57■□□□□ 0.4
SGCA-206ENST00000508382 TEFQ10587 303 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 AOC3Q16853 763 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 NIM1KQ8IY84 436 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
SGCA-206ENST00000508382 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
SGCA-206ENST00000508382 TCERG1O14776 1098 aaKnown RBP17.56■□□□□ 0.4
SGCA-206ENST00000508382 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
SGCA-206ENST00000508382 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
SGCA-206ENST00000508382 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
SGCA-206ENST00000508382 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
SGCA-206ENST00000508382 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
SGCA-206ENST00000508382 HABP4Q5JVS0 413 aaKnown RBP17.55■□□□□ 0.4
SGCA-206ENST00000508382 CDC37L1Q7L3B6 337 aa17.55■□□□□ 0.4
SGCA-206ENST00000508382 CTU1Q7Z7A3 348 aaKnown RBP17.55■□□□□ 0.4
SGCA-206ENST00000508382 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
SGCA-206ENST00000508382 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
SGCA-206ENST00000508382 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
SGCA-206ENST00000508382 CCDC27Q2M243 656 aa17.54■□□□□ 0.4
SGCA-206ENST00000508382 RGMBQ6NW40 437 aa17.54■□□□□ 0.4
SGCA-206ENST00000508382 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
SGCA-206ENST00000508382 MAPK8IP3Q9UPT6 1336 aa17.53■□□□□ 0.4
SGCA-206ENST00000508382 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
SGCA-206ENST00000508382 NEFMP07197 916 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms