RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 ARFGEF2Q9Y6D5 1785 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 KLRG2A4D1S0 409 aaPredicted RBP8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 FSTL1Q12841 308 aa8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 HLFQ16534 295 aa8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 CLEC4GQ6UXB4 293 aa8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 THUMPD2Q9BTF0 503 aaKnown RBP8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 LAMB4A4D0S4 1761 aa8.57□□□□□ -1.04
HMGN1P16-201ENST00000508308 TTLL13PA6NNM8 815 aa8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 ZBTB22O15209 634 aa8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 EIF4A1P60842 406 aaKnown RBP8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 IFFO2Q5TF58 517 aa8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 STYK1Q6J9G0 422 aa8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 PRPF40BQ6NWY9 871 aaKnown RBP8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 OLFM4Q6UX06 510 aa8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 PDZRN3Q9UPQ7 1066 aa8.56□□□□□ -1.04
HMGN1P16-201ENST00000508308 LTBP3Q9NS15 1303 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 NUP98P52948 1817 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 RGL2O15211 777 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 VEGFAP15692 232 aaPredicted RBP8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 MASTLQ96GX5 879 aa8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
HMGN1P16-201ENST00000508308 SNED1Q8TER0 1413 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 EMP3P54852 163 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 ST5P78524 1137 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 TTLL7Q6ZT98 887 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 C16orf71Q8IYS4 520 aaPredicted RBP8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 KLRG1Q96E93 195 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
HMGN1P16-201ENST00000508308 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 NPR1P16066 1061 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 PDIA6Q15084 440 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 TPTE2Q6XPS3 522 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 UBN2Q6ZU65 1347 aa8.53□□□□□ -1.04
HMGN1P16-201ENST00000508308 ERVV-1B6SEH8 477 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 DDNO94850 711 aaPredicted RBP8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 CRY2Q49AN0 593 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 PNISRQ8TF01 805 aaKnown RBP8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 RNF166Q96A37 237 aaPredicted RBP8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 COL4A5P29400 1685 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
HMGN1P16-201ENST00000508308 NPHP1O15259 732 aa8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 MYL6BP14649 208 aa8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 PROSER3Q2NL68 480 aa8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 ZNF277Q9NRM2 450 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 ZNF541Q9H0D2 1346 aa8.51□□□□□ -1.05
HMGN1P16-201ENST00000508308 GPTP24298 496 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 HOXA10P31260 410 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 RIPK4P57078 832 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 RIC1Q4ADV7 1423 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 CCDC93Q567U6 631 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 SOGA3Q5TF21 947 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 SUSD4Q5VX71 490 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 DPY19L2Q6NUT2 758 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 TRIM35Q9UPQ4 493 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 SCN4AP35499 1836 aa8.5□□□□□ -1.05
HMGN1P16-201ENST00000508308 NTSR2O95665 410 aa8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 ANXA1P04083 346 aa8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 TMPOP42166 694 aaKnown RBP8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 RALBP1Q15311 655 aa8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 KRT24Q2M2I5 525 aa8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 MAPK8IP3Q9UPT6 1336 aa8.49□□□□□ -1.05
HMGN1P16-201ENST00000508308 IBTKQ9P2D0 1353 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 ADAMTSL1Q8N6G6 1762 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 FZD9O00144 591 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 NEFMP07197 916 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 ALDH1B1P30837 517 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 DDX10Q13206 875 aaKnown RBP8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 COL13A1Q5TAT6 717 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 CCDC146Q8IYE0 955 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 RTKN2Q8IZC4 609 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 SYNE4Q8N205 404 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 NYXQ9GZU5 481 aa8.48□□□□□ -1.05
HMGN1P16-201ENST00000508308 TAF1DQ9H5J8 278 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms