RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 AACSQ86V21 672 aa15.98■□□□□ 0.15
SNCAIP-209ENST00000508017 ZKSCAN1P17029 563 aaPredicted RBP15.98■□□□□ 0.15
SNCAIP-209ENST00000508017 ZSCAN20P17040 1043 aaPredicted RBP15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 MTX1Q13505 466 aa15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 TFIP11Q9UBB9 837 aaKnown RBP15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 MED1Q15648 1581 aaPredicted RBP15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 SLC27A2O14975 620 aa15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 LRMPQ12912 555 aa15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 ABTB2Q8N961 1025 aa15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 DACT1Q9NYF0 836 aa15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 ZHX1Q9UKY1 873 aaPredicted RBP15.97■□□□□ 0.15
SNCAIP-209ENST00000508017 GOLGA6L6A8MZA4 724 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 TPM3P06753 285 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 PROSER3Q2NL68 480 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 CWF19L2Q2TBE0 894 aaKnown RBP15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 ANO6Q4KMQ2 910 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 MAP4K1Q92918 833 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 CBX8Q9HC52 389 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 C9orf78Q9NZ63 289 aaPredicted RBP15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 NRBP1Q9UHY1 535 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 MAP3K2Q9Y2U5 619 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 A0A0D9SFI3 127 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 GPATCH3Q96I76 525 aa15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 CCDC8Q9H0W5 538 aaPredicted RBP15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 TLR7Q9NYK1 1049 aaKnown RBP15.96■□□□□ 0.15
SNCAIP-209ENST00000508017 LTN1O94822 1766 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 ELP1O95163 1332 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 LARP1Q6PKG0 1096 aaKnown RBP15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 CCDC186Q7Z3E2 898 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 TNMDQ9H2S6 317 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 DMTNQ08495 405 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 CHAF1AQ13111 956 aaPredicted RBP15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 STK3Q13188 491 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 NBPF6Q5VWK0 638 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 PDCL2Q8N4E4 241 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 EAF2Q96CJ1 260 aaPredicted RBP15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 NBPF4Q96M43 638 aa15.95■□□□□ 0.14
SNCAIP-209ENST00000508017 NPHP4O75161 1426 aaPredicted RBP15.94■□□□□ 0.14
SNCAIP-209ENST00000508017 SASH1O94885 1247 aa15.94■□□□□ 0.14
SNCAIP-209ENST00000508017 HOXB7P09629 217 aa15.94■□□□□ 0.14
SNCAIP-209ENST00000508017 TOB2Q14106 344 aaPredicted RBP15.94■□□□□ 0.14
SNCAIP-209ENST00000508017 SPATA32Q96LK8 384 aa15.94■□□□□ 0.14
SNCAIP-209ENST00000508017 RGPD2P0DJD1 1756 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 BLOC1S2Q6QNY1 142 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 MPRIPQ6WCQ1 1025 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 LEO1Q8WVC0 666 aaPredicted RBP15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 ANKRD7Q92527 254 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 ERC1Q8IUD2 1116 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 DRC7Q8IY82 874 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 BOLA2Q9H3K6 86 aa15.93■□□□□ 0.14
SNCAIP-209ENST00000508017 CTIFO43310 598 aaKnown RBP15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 NR1I2O75469 434 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 RPS6KB1P23443 525 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 U2AF2P26368 475 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 PSMA5P28066 241 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 TEFQ10587 303 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 ZNF589Q86UQ0 364 aaPredicted RBP15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 PDCP20941 246 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 ZNF75DP51815 510 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 PGBD1Q96JS3 809 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 C16orf45Q96MC5 204 aaPredicted RBP15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 SIL1Q9H173 461 aa15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
SNCAIP-209ENST00000508017 JAK2O60674 1132 aa15.91■□□□□ 0.14
SNCAIP-209ENST00000508017 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
SNCAIP-209ENST00000508017 TRIM5Q9C035 493 aa15.91■□□□□ 0.14
SNCAIP-209ENST00000508017 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
SNCAIP-209ENST00000508017 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
SNCAIP-209ENST00000508017 EID1Q9Y6B2 187 aa15.91■□□□□ 0.14
SNCAIP-209ENST00000508017 ALDH1L1O75891 902 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 EDC3Q96F86 508 aaKnown RBP15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 SCAND2PQ9GZW5 306 aaPredicted RBP15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 DNAJC25Q9H1X3 360 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 USP54Q70EL1 1684 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 NPHP3Q7Z494 1330 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 ZNF530Q6P9A1 599 aaPredicted RBP15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 RBM43Q6ZSC3 357 aaKnown RBP15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 KLHDC4Q8TBB5 520 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 SNRKQ9NRH2 765 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
SNCAIP-209ENST00000508017 DDX19AQ9NUU7 478 aaKnown RBP15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 HIP1O00291 1037 aa15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 NCBP1Q09161 790 aaKnown RBP15.89■□□□□ 0.13
SNCAIP-209ENST00000508017 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms