RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 RGL2O15211 777 aa18.7■□□□□ 0.58
DDR1-260ENST00000507533 SAPCD2Q86UD0 394 aa18.7■□□□□ 0.58
DDR1-260ENST00000507533 COL4A5P29400 1685 aa18.69■□□□□ 0.58
DDR1-260ENST00000507533 TNRC18O15417 2968 aaPredicted RBP18.69■□□□□ 0.58
DDR1-260ENST00000507533 CELF2O95319 508 aaKnown RBP18.69■□□□□ 0.58
DDR1-260ENST00000507533 SNRPA1P09661 255 aaKnown RBP18.69■□□□□ 0.58
DDR1-260ENST00000507533 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
DDR1-260ENST00000507533 CEMIPQ8WUJ3 1361 aa18.68■□□□□ 0.58
DDR1-260ENST00000507533 HLFQ16534 295 aa18.68■□□□□ 0.58
DDR1-260ENST00000507533 CRY2Q49AN0 593 aa18.68■□□□□ 0.58
DDR1-260ENST00000507533 ADARB2Q9NS39 739 aaKnown RBP18.68■□□□□ 0.58
DDR1-260ENST00000507533 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
DDR1-260ENST00000507533 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
DDR1-260ENST00000507533 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
DDR1-260ENST00000507533 NIM1KQ8IY84 436 aa18.67■□□□□ 0.58
DDR1-260ENST00000507533 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
DDR1-260ENST00000507533 HHIPL1Q96JK4 782 aa18.67■□□□□ 0.58
DDR1-260ENST00000507533 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
DDR1-260ENST00000507533 CIAPIN1Q6FI81 312 aa18.66■□□□□ 0.58
DDR1-260ENST00000507533 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
DDR1-260ENST00000507533 RPGRQ92834 1020 aaKnown RBP18.66■□□□□ 0.58
DDR1-260ENST00000507533 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
DDR1-260ENST00000507533 GPRC5DQ9NZD1 345 aa18.66■□□□□ 0.58
DDR1-260ENST00000507533 HOXA10P31260 410 aaPredicted RBP18.65■□□□□ 0.58
DDR1-260ENST00000507533 GLIS2Q9BZE0 524 aaPredicted RBP18.65■□□□□ 0.58
DDR1-260ENST00000507533 ABCC12Q96J65 1359 aa18.65■□□□□ 0.58
DDR1-260ENST00000507533 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
DDR1-260ENST00000507533 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
DDR1-260ENST00000507533 ZNF408Q9H9D4 720 aa18.64■□□□□ 0.57
DDR1-260ENST00000507533 TRPM7Q96QT4 1865 aa18.63■□□□□ 0.57
DDR1-260ENST00000507533 PPIP5K2O43314 1243 aa18.63■□□□□ 0.57
DDR1-260ENST00000507533 SLC51AQ86UW1 340 aa18.63■□□□□ 0.57
DDR1-260ENST00000507533 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
DDR1-260ENST00000507533 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
DDR1-260ENST00000507533 RBM17Q96I25 401 aaKnown RBP18.62■□□□□ 0.57
DDR1-260ENST00000507533 PGAP2Q9UHJ9 254 aa18.62■□□□□ 0.57
DDR1-260ENST00000507533 CASP8AP2Q9UKL3 1982 aa18.61■□□□□ 0.57
DDR1-260ENST00000507533 CXCL9Q07325 125 aa18.61■□□□□ 0.57
DDR1-260ENST00000507533 NOGQ13253 232 aa18.61■□□□□ 0.57
DDR1-260ENST00000507533 AOC3Q16853 763 aa18.61■□□□□ 0.57
DDR1-260ENST00000507533 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
DDR1-260ENST00000507533 ZIC5Q96T25 663 aa18.61■□□□□ 0.57
DDR1-260ENST00000507533 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
DDR1-260ENST00000507533 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
DDR1-260ENST00000507533 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
DDR1-260ENST00000507533 GMPSP49915 693 aaPredicted RBP18.6■□□□□ 0.57
DDR1-260ENST00000507533 SOX10P56693 466 aa18.6■□□□□ 0.57
DDR1-260ENST00000507533 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
DDR1-260ENST00000507533 ZNRF3Q9ULT6 936 aa18.6■□□□□ 0.57
DDR1-260ENST00000507533 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
DDR1-260ENST00000507533 MCM10Q7L590 875 aa18.59■□□□□ 0.57
DDR1-260ENST00000507533 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
DDR1-260ENST00000507533 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
DDR1-260ENST00000507533 VPS33BQ9H267 617 aa18.59■□□□□ 0.57
DDR1-260ENST00000507533 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
DDR1-260ENST00000507533 PER1O15534 1290 aaPredicted RBP18.58■□□□□ 0.56
DDR1-260ENST00000507533 HIRAP54198 1017 aaPredicted RBP18.58■□□□□ 0.56
DDR1-260ENST00000507533 CDC37L1Q7L3B6 337 aa18.58■□□□□ 0.56
DDR1-260ENST00000507533 ZC3H15Q8WU90 426 aaKnown RBP18.58■□□□□ 0.56
DDR1-260ENST00000507533 GPTP24298 496 aa18.57■□□□□ 0.56
DDR1-260ENST00000507533 HUNKP57058 714 aa18.57■□□□□ 0.56
DDR1-260ENST00000507533 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
DDR1-260ENST00000507533 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
DDR1-260ENST00000507533 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
DDR1-260ENST00000507533 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
DDR1-260ENST00000507533 CNGB1Q14028 1251 aaPredicted RBP18.56■□□□□ 0.56
DDR1-260ENST00000507533 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
DDR1-260ENST00000507533 SUPT20HQ8NEM7 779 aa18.56■□□□□ 0.56
DDR1-260ENST00000507533 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
DDR1-260ENST00000507533 UBN2Q6ZU65 1347 aa18.55■□□□□ 0.56
DDR1-260ENST00000507533 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
DDR1-260ENST00000507533 PRPF38BQ5VTL8 546 aaKnown RBP18.55■□□□□ 0.56
DDR1-260ENST00000507533 KIF6Q6ZMV9 814 aa18.55■□□□□ 0.56
DDR1-260ENST00000507533 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
DDR1-260ENST00000507533 USP48Q86UV5 1035 aa18.55■□□□□ 0.56
DDR1-260ENST00000507533 TRPM4Q8TD43 1214 aa18.55■□□□□ 0.56
DDR1-260ENST00000507533 CDHR2Q9BYE9 1310 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 PDE4DIPQ5VU43 2346 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 RAD17O75943 681 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 DCTN1Q14203 1278 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 TNIP1Q15025 636 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 TTLL7Q6ZT98 887 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 SAGE1Q9NXZ1 904 aa18.54■□□□□ 0.56
DDR1-260ENST00000507533 IBTKQ9P2D0 1353 aaPredicted RBP18.54■□□□□ 0.56
DDR1-260ENST00000507533 RGMBQ6NW40 437 aa18.53■□□□□ 0.56
DDR1-260ENST00000507533 NLRP3Q96P20 1036 aa18.53■□□□□ 0.56
DDR1-260ENST00000507533 RTFDC1Q9BY42 306 aaPredicted RBP18.53■□□□□ 0.56
DDR1-260ENST00000507533 ZBTB3Q9H5J0 574 aa18.53■□□□□ 0.56
DDR1-260ENST00000507533 CNOT7Q9UIV1 285 aaKnown RBP18.53■□□□□ 0.56
DDR1-260ENST00000507533 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
DDR1-260ENST00000507533 FAM155AB1AL88 458 aaPredicted RBP18.52■□□□□ 0.56
DDR1-260ENST00000507533 NTSR2O95665 410 aa18.52■□□□□ 0.56
DDR1-260ENST00000507533 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
DDR1-260ENST00000507533 DLK2Q6UY11 383 aa18.52■□□□□ 0.56
DDR1-260ENST00000507533 DPP8Q6V1X1 898 aaPredicted RBP18.52■□□□□ 0.56
DDR1-260ENST00000507533 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
DDR1-260ENST00000507533 MIS18AQ9NYP9 233 aa18.52■□□□□ 0.56
DDR1-260ENST00000507533 SHTN1A0MZ66 631 aa18.51■□□□□ 0.55
DDR1-260ENST00000507533 H7C1D1 291 aa18.51■□□□□ 0.55
DDR1-260ENST00000507533 TRPA1O75762 1119 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms