RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 ITGAEP38570 1179 aa10.02□□□□□ -0.81
NR1I3-224ENST00000507215 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
NR1I3-224ENST00000507215 NR5A1Q13285 461 aa10.02□□□□□ -0.81
NR1I3-224ENST00000507215 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.81
NR1I3-224ENST00000507215 RGPD1P0DJD0 1748 aa10.02□□□□□ -0.81
NR1I3-224ENST00000507215 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
NR1I3-224ENST00000507215 RAB15P59190 212 aa10.01□□□□□ -0.81
NR1I3-224ENST00000507215 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-224ENST00000507215 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
NR1I3-224ENST00000507215 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
NR1I3-224ENST00000507215 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
NR1I3-224ENST00000507215 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
NR1I3-224ENST00000507215 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
NR1I3-224ENST00000507215 DGAT1O75907 488 aa10□□□□□ -0.81
NR1I3-224ENST00000507215 AVPP01185 164 aa10□□□□□ -0.81
NR1I3-224ENST00000507215 LAPTM4AQ15012 233 aa10□□□□□ -0.81
NR1I3-224ENST00000507215 HDGFL1Q5TGJ6 251 aa10□□□□□ -0.81
NR1I3-224ENST00000507215 WWC1Q8IX03 1113 aa10□□□□□ -0.81
NR1I3-224ENST00000507215 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
NR1I3-224ENST00000507215 ADGRB2O60241 1585 aa10□□□□□ -0.81
NR1I3-224ENST00000507215 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
NR1I3-224ENST00000507215 NRXN1Q9ULB1 1477 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 MYT1Q01538 1121 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 NBPF20Q3BBV1 942 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 TMPRSS4Q9NRS4 437 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
NR1I3-224ENST00000507215 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
NR1I3-224ENST00000507215 MCCD1P59942 119 aaPredicted RBP9.98□□□□□ -0.81
NR1I3-224ENST00000507215 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
NR1I3-224ENST00000507215 ITPKCQ96DU7 683 aa9.98□□□□□ -0.81
NR1I3-224ENST00000507215 CCDC85AQ96PX6 553 aaPredicted RBP9.98□□□□□ -0.81
NR1I3-224ENST00000507215 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
NR1I3-224ENST00000507215 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
NR1I3-224ENST00000507215 YTHDC2Q9H6S0 1430 aaKnown RBP9.98□□□□□ -0.81
NR1I3-224ENST00000507215 ABCA3Q99758 1704 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 TIMP2P16035 220 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 SOX11P35716 441 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-224ENST00000507215 WAPLQ7Z5K2 1190 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 GLMNQ92990 594 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 STK26Q9P289 416 aa9.97□□□□□ -0.81
NR1I3-224ENST00000507215 COL14A1Q05707 1796 aaKnown RBP9.96□□□□□ -0.81
NR1I3-224ENST00000507215 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-224ENST00000507215 ST8SIA5O15466 376 aa9.96□□□□□ -0.82
NR1I3-224ENST00000507215 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
NR1I3-224ENST00000507215 ADGRF5Q8IZF2 1346 aa9.96□□□□□ -0.82
NR1I3-224ENST00000507215 DHX57Q6P158 1386 aaKnown RBP9.96□□□□□ -0.82
NR1I3-224ENST00000507215 SPATA31E1Q6ZUB1 1445 aa9.96□□□□□ -0.82
NR1I3-224ENST00000507215 Q6ZNB5 142 aa9.95□□□□□ -0.82
NR1I3-224ENST00000507215 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
NR1I3-224ENST00000507215 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-224ENST00000507215 DACH1Q9UI36 760 aa9.95□□□□□ -0.82
NR1I3-224ENST00000507215 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
NR1I3-224ENST00000507215 NRAPQ86VF7 1730 aa9.95□□□□□ -0.82
NR1I3-224ENST00000507215 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
NR1I3-224ENST00000507215 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-224ENST00000507215 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
NR1I3-224ENST00000507215 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
NR1I3-224ENST00000507215 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 PLEKHH1Q9ULM0 1364 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 SPATA31A5Q5VU36 1347 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 SPATA31A7Q8IWB4 1347 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 LILRA1O75019 489 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
NR1I3-224ENST00000507215 CBLBQ13191 982 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 ZNF784Q8NCA9 323 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-224ENST00000507215 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 C14orf93Q9H972 538 aaKnown RBP9.93□□□□□ -0.82
NR1I3-224ENST00000507215 THSD7AQ9UPZ6 1657 aa9.93□□□□□ -0.82
NR1I3-224ENST00000507215 SCTRP47872 440 aa9.92□□□□□ -0.82
NR1I3-224ENST00000507215 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-224ENST00000507215 R3HDM1Q15032 1099 aaKnown RBP9.92□□□□□ -0.82
NR1I3-224ENST00000507215 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
NR1I3-224ENST00000507215 TBC1D9Q6ZT07 1266 aa9.92□□□□□ -0.82
NR1I3-224ENST00000507215 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
NR1I3-224ENST00000507215 EMILIN1Q9Y6C2 1016 aa9.92□□□□□ -0.82
NR1I3-224ENST00000507215 TNS1Q9HBL0 1735 aaKnown RBP9.92□□□□□ -0.82
NR1I3-224ENST00000507215 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-224ENST00000507215 CAPN5O15484 640 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-224ENST00000507215 YY1P25490 414 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 TMEM132EQ6IEE7 984 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 TRAF7Q6Q0C0 670 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 ZNF592Q92610 1267 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 CALR3Q96L12 384 aaKnown RBP9.91□□□□□ -0.82
NR1I3-224ENST00000507215 PCDHB11Q9Y5F2 797 aa9.91□□□□□ -0.82
NR1I3-224ENST00000507215 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-224ENST00000507215 NINLQ9Y2I6 1382 aa9.9□□□□□ -0.82
NR1I3-224ENST00000507215 ALS2Q96Q42 1657 aa9.9□□□□□ -0.82
NR1I3-224ENST00000507215 DHX9Q08211 1270 aaKnown RBP9.9□□□□□ -0.82
NR1I3-224ENST00000507215 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
NR1I3-224ENST00000507215 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
NR1I3-224ENST00000507215 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms