RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 FZD9O00144 591 aa12.14□□□□□ -0.47
COPS4-204ENST00000506443 STARD3NLO95772 234 aa12.14□□□□□ -0.47
COPS4-204ENST00000506443 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
COPS4-204ENST00000506443 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
COPS4-204ENST00000506443 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
COPS4-204ENST00000506443 DLK2Q6UY11 383 aa12.14□□□□□ -0.47
COPS4-204ENST00000506443 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
COPS4-204ENST00000506443 LAMB4A4D0S4 1761 aa12.14□□□□□ -0.47
COPS4-204ENST00000506443 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
COPS4-204ENST00000506443 A0A087WZG4 1122 aa12.13□□□□□ -0.47
COPS4-204ENST00000506443 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
COPS4-204ENST00000506443 RGS19P49795 217 aa12.13□□□□□ -0.47
COPS4-204ENST00000506443 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
COPS4-204ENST00000506443 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
COPS4-204ENST00000506443 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
COPS4-204ENST00000506443 NUP98P52948 1817 aa12.12□□□□□ -0.47
COPS4-204ENST00000506443 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
COPS4-204ENST00000506443 MAP2K1Q02750 393 aaPredicted RBP12.12□□□□□ -0.47
COPS4-204ENST00000506443 CNGB1Q14028 1251 aaPredicted RBP12.12□□□□□ -0.47
COPS4-204ENST00000506443 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
COPS4-204ENST00000506443 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
COPS4-204ENST00000506443 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
COPS4-204ENST00000506443 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
COPS4-204ENST00000506443 SHTN1A0MZ66 631 aa12.11□□□□□ -0.47
COPS4-204ENST00000506443 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
COPS4-204ENST00000506443 NPR1P16066 1061 aa12.11□□□□□ -0.47
COPS4-204ENST00000506443 SOX10P56693 466 aa12.11□□□□□ -0.47
COPS4-204ENST00000506443 HLFQ16534 295 aa12.11□□□□□ -0.47
COPS4-204ENST00000506443 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
COPS4-204ENST00000506443 NUTM1Q86Y26 1132 aa12.11□□□□□ -0.47
COPS4-204ENST00000506443 TEX13AQ9BXU3 409 aaPredicted RBP12.11□□□□□ -0.47
COPS4-204ENST00000506443 LAMB2P55268 1798 aa12.1□□□□□ -0.47
COPS4-204ENST00000506443 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
COPS4-204ENST00000506443 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
COPS4-204ENST00000506443 DIAPH1O60610 1272 aaKnown RBP12.1□□□□□ -0.47
COPS4-204ENST00000506443 GPC2Q8N158 579 aa12.1□□□□□ -0.47
COPS4-204ENST00000506443 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
COPS4-204ENST00000506443 TAF1P21675 1872 aa12.1□□□□□ -0.47
COPS4-204ENST00000506443 COL4A1P02462 1669 aa12.1□□□□□ -0.47
COPS4-204ENST00000506443 TEFQ10587 303 aa12.09□□□□□ -0.47
COPS4-204ENST00000506443 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
COPS4-204ENST00000506443 PHACTR3Q96KR7 559 aa12.09□□□□□ -0.47
COPS4-204ENST00000506443 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
COPS4-204ENST00000506443 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
COPS4-204ENST00000506443 TLL2Q9Y6L7 1015 aa12.09□□□□□ -0.47
COPS4-204ENST00000506443 DGKZQ13574 1117 aa12.08□□□□□ -0.48
COPS4-204ENST00000506443 CC2D1BQ5T0F9 858 aaKnown RBP12.08□□□□□ -0.48
COPS4-204ENST00000506443 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
COPS4-204ENST00000506443 ZNF408Q9H9D4 720 aa12.08□□□□□ -0.48
COPS4-204ENST00000506443 GNAT3A8MTJ3 354 aa12.07□□□□□ -0.48
COPS4-204ENST00000506443 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
COPS4-204ENST00000506443 DUOX1Q9NRD9 1551 aa12.07□□□□□ -0.48
COPS4-204ENST00000506443 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
COPS4-204ENST00000506443 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
COPS4-204ENST00000506443 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
COPS4-204ENST00000506443 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
COPS4-204ENST00000506443 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 MCM10Q7L590 875 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 RTKN2Q8IZC4 609 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 KIF7Q2M1P5 1343 aa12.06□□□□□ -0.48
COPS4-204ENST00000506443 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 LMOD1P29536 600 aaPredicted RBP12.05□□□□□ -0.48
COPS4-204ENST00000506443 AOC3Q16853 763 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 PSMD1Q99460 953 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
COPS4-204ENST00000506443 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
COPS4-204ENST00000506443 GPTP24298 496 aa12.04□□□□□ -0.48
COPS4-204ENST00000506443 ECE1P42892 770 aa12.04□□□□□ -0.48
COPS4-204ENST00000506443 GMPSP49915 693 aaPredicted RBP12.04□□□□□ -0.48
COPS4-204ENST00000506443 HIRAP54198 1017 aaPredicted RBP12.04□□□□□ -0.48
COPS4-204ENST00000506443 EIF6P56537 245 aaKnown RBP12.04□□□□□ -0.48
COPS4-204ENST00000506443 GAS2L2Q8NHY3 880 aa12.04□□□□□ -0.48
COPS4-204ENST00000506443 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
COPS4-204ENST00000506443 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
COPS4-204ENST00000506443 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
COPS4-204ENST00000506443 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
COPS4-204ENST00000506443 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
COPS4-204ENST00000506443 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
COPS4-204ENST00000506443 GPRC5DQ9NZD1 345 aa12.03□□□□□ -0.48
COPS4-204ENST00000506443 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
COPS4-204ENST00000506443 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
COPS4-204ENST00000506443 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
COPS4-204ENST00000506443 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
COPS4-204ENST00000506443 EGFRP00533 1210 aa12.02□□□□□ -0.49
COPS4-204ENST00000506443 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
COPS4-204ENST00000506443 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
COPS4-204ENST00000506443 RGL2O15211 777 aa12.01□□□□□ -0.49
COPS4-204ENST00000506443 CXCL9Q07325 125 aa12.01□□□□□ -0.49
COPS4-204ENST00000506443 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
COPS4-204ENST00000506443 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
COPS4-204ENST00000506443 NIM1KQ8IY84 436 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms