RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CHD2O14647 1828 aaKnown RBP9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 UBE2HP62256 183 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 CCDC183Q5T5S1 534 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 COPS6Q7L5N1 327 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 TMEM87AQ8NBN3 555 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 RAPGEF4Q8WZA2 1011 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 TCEANC2Q96MN5 208 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 NCAPD2Q15021 1401 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 A0A0D9SFI3 127 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZNF500O60304 480 aaPredicted RBP9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 MAP4K1Q92918 833 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 MYD88Q99836 296 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 TM6SF1Q9BZW5 370 aa9.12□□□□□ -0.95
PPARGC1A-204ENST00000506055 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 HCLS1P14317 486 aaPredicted RBP9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 EPHA10Q5JZY3 1008 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 EDC3Q96F86 508 aaKnown RBP9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 SH2B1Q9NRF2 756 aaPredicted RBP9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 TCHHQ07283 1943 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 UTYO14607 1347 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 HIP1O00291 1037 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 SLC27A2O14975 620 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 TPM2P07951 284 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 PLCB2Q00722 1185 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 GCKRQ14397 625 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 LARP1BQ659C4 914 aaKnown RBP9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 SLC52A2Q9HAB3 445 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 USP25Q9UHP3 1055 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 MTMR6Q9Y217 621 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 TAF6LQ9Y6J9 622 aa9.11□□□□□ -0.95
PPARGC1A-204ENST00000506055 ST3GAL1Q11201 340 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 FERMT3Q86UX7 667 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 PROSER2Q86WR7 435 aaPredicted RBP9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 KCNB2Q92953 911 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZNF496Q96IT1 587 aaPredicted RBP9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 ERBB3P21860 1342 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 LETM1O95202 739 aaPredicted RBP9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 PSMA5P28066 241 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 MCM5P33992 734 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 STK3Q13188 491 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 RNF20Q5VTR2 975 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 BLOC1S2Q6QNY1 142 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 FAM184AQ8NB25 1140 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZNF830Q96NB3 372 aaPredicted RBP9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 USP16Q9Y5T5 823 aa9.1□□□□□ -0.95
PPARGC1A-204ENST00000506055 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 ZNF589Q86UQ0 364 aaPredicted RBP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 DDX17Q92841 729 aaKnown RBP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 CCDC9Q9Y3X0 531 aaKnown RBP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 CRYBG1Q9Y4K1 1723 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 ATP5J2-PTCD1G3V325 749 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 RRP9O43818 475 aaKnown RBP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 FAM173BQ6P4H8 233 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 UBE3BQ7Z3V4 1068 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 METTL22Q9BUU2 404 aaPredicted RBP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 OVOS2A0A0G2JMS6 1433 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 NPHP3Q7Z494 1330 aa9.09□□□□□ -0.95
PPARGC1A-204ENST00000506055 ADCY5O95622 1261 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 PHKG2P15735 406 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 TFCP2Q12800 502 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 CABLES1Q8TDN4 633 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 CHGBP05060 677 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 UVSSAQ2YD98 709 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 CDC37L1Q7L3B6 337 aa9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 DNAJC2Q99543 621 aaKnown RBP9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 PHRF1Q9P1Y6 1649 aaKnown RBP9.08□□□□□ -0.96
PPARGC1A-204ENST00000506055 SNRPA1P09661 255 aaKnown RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 RPS6KB1P23443 525 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 RBM10P98175 930 aaKnown RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 CAMK4Q16566 473 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 DBNLQ9UJU6 430 aaKnown RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 A0A087WZG4 1122 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 TAF5LO75529 589 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 PTPN12Q05209 780 aaKnown RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 TOB2Q14106 344 aaPredicted RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 ANKRD1Q15327 319 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 CHRNA2Q15822 529 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 TNNI3KQ59H18 835 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 IFNL2Q8IZJ0 200 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 TFIP11Q9UBB9 837 aaKnown RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 FPGT-TNNI3KV9GXZ4 949 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 SLIT3O75094 1523 aa9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 KDM6AO15550 1401 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms