RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
NR1I3-221ENST00000505944 HSPA8P11142 646 aaKnown RBP9.01□□□□□ -0.97
NR1I3-221ENST00000505944 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
NR1I3-221ENST00000505944 NPR1P16066 1061 aa9.01□□□□□ -0.97
NR1I3-221ENST00000505944 EPHX2P34913 555 aa9.01□□□□□ -0.97
NR1I3-221ENST00000505944 FKBP4Q02790 459 aaKnown RBP eCLIP9.01□□□□□ -0.97
NR1I3-221ENST00000505944 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
NR1I3-221ENST00000505944 TBC1D9BQ66K14 1250 aa9.01□□□□□ -0.97
NR1I3-221ENST00000505944 CC2D2BQ6DHV5 1058 aa9.01□□□□□ -0.97
NR1I3-221ENST00000505944 GPC2Q8N158 579 aa9.01□□□□□ -0.97
NR1I3-221ENST00000505944 PNISRQ8TF01 805 aaKnown RBP9.01□□□□□ -0.97
NR1I3-221ENST00000505944 WDR33Q9C0J8 1336 aaKnown RBP9.01□□□□□ -0.97
NR1I3-221ENST00000505944 HEG1Q9ULI3 1381 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 ADAMTSL1Q8N6G6 1762 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 ALDH1B1P30837 517 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 TEFQ10587 303 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 FAM161AQ3B820 660 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
NR1I3-221ENST00000505944 ZNF790Q6PG37 636 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 CNTROBQ8N137 903 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 FMNL2Q96PY5 1086 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
NR1I3-221ENST00000505944 ABT1Q9ULW3 272 aaKnown RBP9□□□□□ -0.97
NR1I3-221ENST00000505944 THSD7BQ9C0I4 1608 aa9□□□□□ -0.97
NR1I3-221ENST00000505944 KLRG2A4D1S0 409 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-221ENST00000505944 POTEIP0CG38 1075 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 POTEJP0CG39 1038 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 LMOD1P29536 600 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-221ENST00000505944 MAP2K2P36507 400 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 DCTN1Q14203 1278 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 NBPF5PQ86XG9 351 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-221ENST00000505944 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 JDP2Q8WYK2 163 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 ZNF496Q96IT1 587 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-221ENST00000505944 PLEKHF1Q96S99 279 aa8.99□□□□□ -0.97
NR1I3-221ENST00000505944 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 FZD9O00144 591 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 APAF1O14727 1248 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 CCDC24Q8N4L8 307 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 C7orf43Q8WVR3 580 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 HHIPL1Q96JK4 782 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 PSMD1Q99460 953 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 TBC1D2BQ9UPU7 963 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 ZNF330Q9Y3S2 320 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-221ENST00000505944 MAPK8IP3Q9UPT6 1336 aa8.98□□□□□ -0.97
NR1I3-221ENST00000505944 LAMB4A4D0S4 1761 aa8.97□□□□□ -0.97
NR1I3-221ENST00000505944 PDE4DIPQ5VU43 2346 aa8.97□□□□□ -0.97
NR1I3-221ENST00000505944 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
NR1I3-221ENST00000505944 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
NR1I3-221ENST00000505944 IARSP41252 1262 aaKnown RBP8.97□□□□□ -0.97
NR1I3-221ENST00000505944 EIF6P56537 245 aaKnown RBP8.97□□□□□ -0.97
NR1I3-221ENST00000505944 USP50Q70EL3 339 aaPredicted RBP8.97□□□□□ -0.97
NR1I3-221ENST00000505944 MCM10Q7L590 875 aa8.97□□□□□ -0.97
NR1I3-221ENST00000505944 DZIP3Q86Y13 1208 aaKnown RBP8.97□□□□□ -0.97
NR1I3-221ENST00000505944 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
NR1I3-221ENST00000505944 DDX21Q9NR30 783 aaKnown RBP eCLIP8.97□□□□□ -0.97
NR1I3-221ENST00000505944 CCDC85CA6NKD9 419 aa8.96□□□□□ -0.98
NR1I3-221ENST00000505944 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
NR1I3-221ENST00000505944 CAPNS2Q96L46 248 aa8.96□□□□□ -0.98
NR1I3-221ENST00000505944 GPR101Q96P66 508 aaPredicted RBP8.96□□□□□ -0.98
NR1I3-221ENST00000505944 VPS33BQ9H267 617 aa8.96□□□□□ -0.98
NR1I3-221ENST00000505944 CEMIPQ8WUJ3 1361 aa8.96□□□□□ -0.98
NR1I3-221ENST00000505944 A1BGP04217 495 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 MAP1SQ66K74 1059 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-221ENST00000505944 RUNDC1Q96C34 613 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 NYXQ9GZU5 481 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 TMX4Q9H1E5 349 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-221ENST00000505944 ZNF277Q9NRM2 450 aaPredicted RBP8.95□□□□□ -0.98
NR1I3-221ENST00000505944 MIS18AQ9NYP9 233 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 RNF123Q5XPI4 1314 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 ZNF541Q9H0D2 1346 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 TRPM7Q96QT4 1865 aa8.95□□□□□ -0.98
NR1I3-221ENST00000505944 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-221ENST00000505944 TMPOP42166 694 aaKnown RBP8.94□□□□□ -0.98
NR1I3-221ENST00000505944 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-221ENST00000505944 RIPK4P57078 832 aa8.94□□□□□ -0.98
NR1I3-221ENST00000505944 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
NR1I3-221ENST00000505944 TLL2Q9Y6L7 1015 aa8.94□□□□□ -0.98
NR1I3-221ENST00000505944 CDHR2Q9BYE9 1310 aa8.94□□□□□ -0.98
NR1I3-221ENST00000505944 NUP98P52948 1817 aa8.94□□□□□ -0.98
NR1I3-221ENST00000505944 BTBD11A6QL63 1104 aa8.93□□□□□ -0.98
NR1I3-221ENST00000505944 KCNQ3O43525 872 aa8.93□□□□□ -0.98
NR1I3-221ENST00000505944 NEFMP07197 916 aa8.93□□□□□ -0.98
NR1I3-221ENST00000505944 SNRPA1P09661 255 aaKnown RBP8.93□□□□□ -0.98
NR1I3-221ENST00000505944 CRY2Q49AN0 593 aa8.93□□□□□ -0.98
NR1I3-221ENST00000505944 SYNE4Q8N205 404 aa8.93□□□□□ -0.98
NR1I3-221ENST00000505944 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
NR1I3-221ENST00000505944 IBTKQ9P2D0 1353 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-221ENST00000505944 RIC1Q4ADV7 1423 aa8.93□□□□□ -0.98
NR1I3-221ENST00000505944 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
NR1I3-221ENST00000505944 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
NR1I3-221ENST00000505944 PIP4K2AP48426 406 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-221ENST00000505944 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
NR1I3-221ENST00000505944 ADARB2Q9NS39 739 aaKnown RBP8.92□□□□□ -0.98
NR1I3-221ENST00000505944 TRIM35Q9UPQ4 493 aa8.92□□□□□ -0.98
NR1I3-221ENST00000505944 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
NR1I3-221ENST00000505944 LAS1LQ9Y4W2 734 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms