RNA–Protein interactions for RNA: ENST00000505911.5

TCP11-222, Transcript of t-complex 11, human

TSL 1 (best)

Gene TCP11, Length 1,974 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-222	ENST00000505911	SH3TC1	Q8TE82	1336 aa		18.52	■□□□□ 0.56
TCP11-222	ENST00000505911	GRIN3B	O60391	1043 aa		18.52	■□□□□ 0.56
TCP11-222	ENST00000505911	SMC4	Q9NTJ3	1288 aa		18.52	■□□□□ 0.56
TCP11-222	ENST00000505911	PXDNL	A1KZ92	1463 aa		18.52	■□□□□ 0.55
TCP11-222	ENST00000505911	KLRG2	A4D1S0	409 aa	Predicted RBP	18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	BRPF1	P55201	1214 aa	Predicted RBP	18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	ERFE	Q4G0M1	354 aa		18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	CWC25	Q9NXE8	425 aa	Predicted RBP	18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	ADCY9	O60503	1353 aa		18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	NUTM1	Q86Y26	1132 aa		18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	CCDC24	Q8N4L8	307 aa		18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	NLRP3	Q96P20	1036 aa		18.51	■□□□□ 0.55
TCP11-222	ENST00000505911	KCNA3	P22001	575 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	DALRD3	Q5D0E6	543 aa	Known RBP	18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	PELP1	Q8IZL8	1130 aa	Known RBP	18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	LINS1	Q8NG48	757 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	MASTL	Q96GX5	879 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	RIC1	Q4ADV7	1423 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	CHRNA5	P30532	468 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	RARS	P54136	660 aa	Known RBP	18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	STYK1	Q6J9G0	422 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	CNKSR1	Q969H4	720 aa		18.5	■□□□□ 0.55
TCP11-222	ENST00000505911	NPR1	P16066	1061 aa		18.49	■□□□□ 0.55
TCP11-222	ENST00000505911	TTLL6	Q8N841	843 aa		18.49	■□□□□ 0.55
TCP11-222	ENST00000505911	ANKRD36C	Q5JPF3	1778 aa		18.48	■□□□□ 0.55
TCP11-222	ENST00000505911	SRGN	P10124	158 aa		18.48	■□□□□ 0.55
TCP11-222	ENST00000505911	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
TCP11-222	ENST00000505911	ARFGEF2	Q9Y6D5	1785 aa		18.48	■□□□□ 0.55
TCP11-222	ENST00000505911	PCCA	P05165	728 aa	Predicted RBP	18.48	■□□□□ 0.55
TCP11-222	ENST00000505911	ALDH1B1	P30837	517 aa		18.48	■□□□□ 0.55
TCP11-222	ENST00000505911	NEURL1B	A8MQ27	555 aa		18.47	■□□□□ 0.55
TCP11-222	ENST00000505911	IPO8	O15397	1037 aa	Known RBP	18.47	■□□□□ 0.55
TCP11-222	ENST00000505911	BCL2L13	Q9BXK5	485 aa		18.47	■□□□□ 0.55
TCP11-222	ENST00000505911	BCS1L	Q9Y276	419 aa		18.47	■□□□□ 0.55
TCP11-222	ENST00000505911	IGKV5-2	P06315	115 aa		18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	CRY2	Q49AN0	593 aa		18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	ARHGAP45	Q92619	1136 aa		18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	RPGR	Q92834	1020 aa	Known RBP	18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	FAM89A	Q96GI7	184 aa		18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	KIF16B	Q96L93	1317 aa		18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	ALDH1L1	O75891	902 aa		18.46	■□□□□ 0.55
TCP11-222	ENST00000505911	API5	Q9BZZ5	524 aa	Known RBP	18.46	■□□□□ 0.55
TCP11-222	ENST00000505911		F6X3S4	739 aa		18.45	■□□□□ 0.54
TCP11-222	ENST00000505911	RBM17	Q96I25	401 aa	Known RBP	18.45	■□□□□ 0.54
TCP11-222	ENST00000505911	IRS4	O14654	1257 aa	Predicted RBP	18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	GCKR	Q14397	625 aa		18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	CWF19L2	Q2TBE0	894 aa	Known RBP	18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	BEND3	Q5T5X7	828 aa		18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	SLC4A10	Q6U841	1118 aa		18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	SRCIN1	Q9C0H9	1055 aa		18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	NOB1	Q9ULX3	412 aa	Known RBP	18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	ABCC12	Q96J65	1359 aa		18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	HOXA10	P31260	410 aa	Predicted RBP	18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.44	■□□□□ 0.54
TCP11-222	ENST00000505911	CDHR2	Q9BYE9	1310 aa		18.43	■□□□□ 0.54
TCP11-222	ENST00000505911		H7C1W4	665 aa		18.43	■□□□□ 0.54
TCP11-222	ENST00000505911	HCLS1	P14317	486 aa	Predicted RBP	18.43	■□□□□ 0.54
TCP11-222	ENST00000505911	YBX3	P16989	372 aa	Known RBP eCLIP	18.43	■□□□□ 0.54
TCP11-222	ENST00000505911	CRAMP1	Q96RY5	1269 aa		18.43	■□□□□ 0.54
TCP11-222	ENST00000505911	KIAA1551	Q9HCM1	1747 aa		18.43	■□□□□ 0.54
TCP11-222	ENST00000505911	PDE8A	O60658	829 aa		18.42	■□□□□ 0.54
TCP11-222	ENST00000505911	SOGA3	Q5TF21	947 aa		18.42	■□□□□ 0.54
TCP11-222	ENST00000505911	ANKRD31	Q8N7Z5	1873 aa		18.42	■□□□□ 0.54
TCP11-222	ENST00000505911	SF3B3	Q15393	1217 aa	Known RBP	18.42	■□□□□ 0.54
TCP11-222	ENST00000505911	SYNE4	Q8N205	404 aa		18.42	■□□□□ 0.54
TCP11-222	ENST00000505911	RTL5	Q5HYW3	569 aa	Predicted RBP	18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	DDX46	Q7L014	1031 aa	Known RBP	18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	WWC3	Q9ULE0	1092 aa		18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	SRCAP	Q6ZRS2	3230 aa		18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	CCT4	P50991	539 aa	Known RBP	18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	TMX4	Q9H1E5	349 aa	Predicted RBP	18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.41	■□□□□ 0.54
TCP11-222	ENST00000505911	BBOX1	O75936	387 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	GRIPAP1	Q4V328	841 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	PRPF40B	Q6NWY9	871 aa	Known RBP	18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	UBE3B	Q7Z3V4	1068 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	YTHDC1	Q96MU7	727 aa	Known RBP	18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	BCAR3	O75815	825 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	CCDC152	Q4G0S7	254 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	CC2D2B	Q6DHV5	1058 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	ARHGAP27	Q6ZUM4	889 aa		18.39	■□□□□ 0.53
TCP11-222	ENST00000505911	DLEC1	Q9Y238	1755 aa		18.38	■□□□□ 0.53
TCP11-222	ENST00000505911	GRM8	O00222	908 aa		18.38	■□□□□ 0.53
TCP11-222	ENST00000505911	ZKSCAN2	Q63HK3	967 aa		18.38	■□□□□ 0.53
TCP11-222	ENST00000505911	TMC4	Q7Z404	712 aa		18.38	■□□□□ 0.53
TCP11-222	ENST00000505911	FRAT1	Q92837	279 aa	Predicted RBP	18.38	■□□□□ 0.53
TCP11-222	ENST00000505911	PLA2G12B	Q9BX93	195 aa		18.38	■□□□□ 0.53
TCP11-222	ENST00000505911	C3orf67	Q6ZVT6	689 aa		18.37	■□□□□ 0.53
TCP11-222	ENST00000505911	HDAC5	Q9UQL6	1122 aa		18.37	■□□□□ 0.53
TCP11-222	ENST00000505911	BRCA1	P38398	1863 aa	Known RBP	18.37	■□□□□ 0.53
TCP11-222	ENST00000505911	ATF7IP	Q6VMQ6	1270 aa		18.37	■□□□□ 0.53
TCP11-222	ENST00000505911	C21orf2	O43822	256 aa		18.36	■□□□□ 0.53
TCP11-222	ENST00000505911	JARID2	Q92833	1246 aa	Predicted RBP	18.36	■□□□□ 0.53
TCP11-222	ENST00000505911	RTKN2	Q8IZC4	609 aa		18.35	■□□□□ 0.53
TCP11-222	ENST00000505911	MS4A1	P11836	297 aa		18.35	■□□□□ 0.53
TCP11-222	ENST00000505911	CASP7	P55210	303 aa		18.35	■□□□□ 0.53
TCP11-222	ENST00000505911	CTSW	P56202	376 aa		18.35	■□□□□ 0.53
TCP11-222	ENST00000505911	GRAP	Q13588	217 aa		18.35	■□□□□ 0.53
TCP11-222	ENST00000505911	GRAPL	Q8TC17	118 aa	Predicted RBP	18.35	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms