RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 DNM1Q05193 864 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-204ENST00000505804 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-204ENST00000505804 TRERF1Q96PN7 1200 aa7.27□□□□□ -1.25
TOPBP1-204ENST00000505804 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-204ENST00000505804 EFSO43281 561 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 FZD6O60353 706 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 GRIN2CQ14957 1233 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 SLC16A10Q8TF71 515 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 PIK3R5Q8WYR1 880 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 EDEM1Q92611 657 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 CFHR5Q9BXR6 569 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 ATXN7L1Q9ULK2 861 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 ERBB4Q15303 1308 aa7.26□□□□□ -1.25
TOPBP1-204ENST00000505804 CD33P20138 364 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 CTBSQ01459 385 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 ZNF775Q96BV0 537 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 NUDT16Q96DE0 195 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 FAM13BQ9NYF5 915 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 MARK1Q9P0L2 795 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 POLIQ9UNA4 740 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 PHF24Q9UPV7 400 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 KCNH4Q9UQ05 1017 aa7.25□□□□□ -1.25
TOPBP1-204ENST00000505804 EPB42P16452 691 aa7.24□□□□□ -1.25
TOPBP1-204ENST00000505804 FGFR3P22607 806 aa7.24□□□□□ -1.25
TOPBP1-204ENST00000505804 MZF1P28698 734 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-204ENST00000505804 NFX1Q12986 1120 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-204ENST00000505804 BRPF3Q9ULD4 1205 aa7.24□□□□□ -1.25
TOPBP1-204ENST00000505804 KCNMB2Q9Y691 235 aa7.24□□□□□ -1.25
TOPBP1-204ENST00000505804 PDGFAP04085 211 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 KCNQ4P56696 695 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 LAMC2Q13753 1193 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 GAS6Q14393 721 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 IRF7Q92985 503 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
TOPBP1-204ENST00000505804 NDUFB5O43674 189 aa7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 MAPK1P28482 360 aa7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 MARSP56192 900 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 C8orf34Q49A92 452 aa7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 RNFT1Q5M7Z0 435 aa7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 SLC30A3Q99726 388 aa7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 COL25A1Q9BXS0 654 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 DCTN4Q9UJW0 460 aa7.22□□□□□ -1.25
TOPBP1-204ENST00000505804 A6NHS1 94 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 C2CD2LO14523 706 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 XYLBO75191 536 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 PCSK2P16519 638 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 MX2P20592 715 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 TRIP4Q15650 581 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 CCDC27Q2M243 656 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 LCE2CQ5TA81 110 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 TMC1Q8TDI8 760 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
TOPBP1-204ENST00000505804 UBAP1LF5GYI3 381 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 SASH3O75995 380 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 WFS1O76024 890 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 TARSP26639 723 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 SPEM2Q0P670 501 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 CCINQ13939 588 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 FAM182BQ5T319 152 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 KRT25Q7Z3Z0 450 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 TTC16Q8NEE8 873 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 PODXL2Q9NZ53 605 aa7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 FNDC3AQ9Y2H6 1198 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-204ENST00000505804 EGFRP00533 1210 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 BMP4P12644 408 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 USP5P45974 858 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 KRT76Q01546 638 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 GJD3Q8N144 294 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 CITED4Q96RK1 184 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 MBIPQ9NS73 344 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 PRR12Q9ULL5 1215 aa7.19□□□□□ -1.26
TOPBP1-204ENST00000505804 RPLP1P05386 114 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 GMPRP36959 345 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 BHMTQ93088 406 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 CNTNAP3BQ96NU0 1288 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 PNMA5Q96PV4 448 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 RBCK1Q9BYM8 510 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 CNTNAP3Q9BZ76 1288 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
TOPBP1-204ENST00000505804 NFKB1P19838 968 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 PCBP4P57723 403 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 TREML4Q6UXN2 200 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 TMC7Q7Z402 723 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 ZNF438Q7Z4V0 828 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 ELP3Q9H9T3 547 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 IGF1RP08069 1367 aa7.17□□□□□ -1.26
TOPBP1-204ENST00000505804 IGHA2P01877 340 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 PDE3BQ13370 1112 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 XKR5Q6UX68 686 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 SYT9Q86SS6 491 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 NLRP13Q86W25 1043 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 ZSCAN29Q8IWY8 852 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 ASB16Q96NS5 453 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms