RNA–Protein interactions for RNA: ENST00000505753.1

SIM1-203, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 2

Gene SIM1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-203ENST00000505753 HOXA10P31260 410 aaPredicted RBP12.09□□□□□ -0.47
SIM1-203ENST00000505753 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
SIM1-203ENST00000505753 KSR2Q6VAB6 950 aa12.09□□□□□ -0.47
SIM1-203ENST00000505753 G2E3Q7L622 706 aa12.09□□□□□ -0.47
SIM1-203ENST00000505753 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
SIM1-203ENST00000505753 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
SIM1-203ENST00000505753 STK31Q9BXU1 1019 aa12.09□□□□□ -0.47
SIM1-203ENST00000505753 ADCY9O60503 1353 aa12.08□□□□□ -0.48
SIM1-203ENST00000505753 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
SIM1-203ENST00000505753 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
SIM1-203ENST00000505753 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
SIM1-203ENST00000505753 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
SIM1-203ENST00000505753 TTLL6Q8N841 843 aa12.08□□□□□ -0.48
SIM1-203ENST00000505753 C7orf43Q8WVR3 580 aa12.08□□□□□ -0.48
SIM1-203ENST00000505753 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
SIM1-203ENST00000505753 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
SIM1-203ENST00000505753 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
SIM1-203ENST00000505753 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
SIM1-203ENST00000505753 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
SIM1-203ENST00000505753 FLIIQ13045 1269 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
SIM1-203ENST00000505753 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
SIM1-203ENST00000505753 IGKV5-2P06315 115 aa12.06□□□□□ -0.48
SIM1-203ENST00000505753 NPR1P16066 1061 aa12.06□□□□□ -0.48
SIM1-203ENST00000505753 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
SIM1-203ENST00000505753 RIC3Q7Z5B4 369 aa12.06□□□□□ -0.48
SIM1-203ENST00000505753 CNKSR1Q969H4 720 aa12.06□□□□□ -0.48
SIM1-203ENST00000505753 BCS1LQ9Y276 419 aa12.06□□□□□ -0.48
SIM1-203ENST00000505753 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
SIM1-203ENST00000505753 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
SIM1-203ENST00000505753 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
SIM1-203ENST00000505753 COL11A2P13942 1736 aaPredicted RBP12.04□□□□□ -0.48
SIM1-203ENST00000505753 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
SIM1-203ENST00000505753 ATP5J2-PTCD1G3V325 749 aa12.04□□□□□ -0.48
SIM1-203ENST00000505753 GTF2E1P29083 439 aaPredicted RBP12.04□□□□□ -0.48
SIM1-203ENST00000505753 ALDH1L2Q3SY69 923 aa12.04□□□□□ -0.48
SIM1-203ENST00000505753 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
SIM1-203ENST00000505753 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
SIM1-203ENST00000505753 ZBTB38Q8NAP3 1195 aaPredicted RBP12.04□□□□□ -0.48
SIM1-203ENST00000505753 CRAMP1Q96RY5 1269 aa12.04□□□□□ -0.48
SIM1-203ENST00000505753 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
SIM1-203ENST00000505753 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 ARFGEF2Q9Y6D5 1785 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 NPHP1O15259 732 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 PCCAP05165 728 aaPredicted RBP12.03□□□□□ -0.48
SIM1-203ENST00000505753 ALDH1B1P30837 517 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 SF3B3Q15393 1217 aaKnown RBP12.03□□□□□ -0.48
SIM1-203ENST00000505753 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
SIM1-203ENST00000505753 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
SIM1-203ENST00000505753 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
SIM1-203ENST00000505753 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 FAM89AQ96GI7 184 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 ZBED9Q6R2W3 1325 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 LTBP3Q9NS15 1303 aa12.03□□□□□ -0.48
SIM1-203ENST00000505753 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
SIM1-203ENST00000505753 CACNA1FO60840 1977 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 NEURL1BA8MQ27 555 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 H7C1W4 665 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49
SIM1-203ENST00000505753 LINS1Q8NG48 757 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 ZNF622Q969S3 477 aaKnown RBP eCLIP12.02□□□□□ -0.49
SIM1-203ENST00000505753 MYD88Q99836 296 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 CWC25Q9NXE8 425 aaPredicted RBP12.02□□□□□ -0.49
SIM1-203ENST00000505753 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
SIM1-203ENST00000505753 NFKBIEO00221 500 aa12.01□□□□□ -0.49
SIM1-203ENST00000505753 CASP7P55210 303 aa12.01□□□□□ -0.49
SIM1-203ENST00000505753 FKBP5Q13451 457 aaPredicted RBP12.01□□□□□ -0.49
SIM1-203ENST00000505753 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
SIM1-203ENST00000505753 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
SIM1-203ENST00000505753 IRS4O14654 1257 aaPredicted RBP12□□□□□ -0.49
SIM1-203ENST00000505753 C21orf2O43822 256 aa12□□□□□ -0.49
SIM1-203ENST00000505753 HCLS1P14317 486 aaPredicted RBP12□□□□□ -0.49
SIM1-203ENST00000505753 HSP90B1P14625 803 aaKnown RBP12□□□□□ -0.49
SIM1-203ENST00000505753 PRELPP51888 382 aa12□□□□□ -0.49
SIM1-203ENST00000505753 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
SIM1-203ENST00000505753 GCKRQ14397 625 aa12□□□□□ -0.49
SIM1-203ENST00000505753 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
SIM1-203ENST00000505753 SOGA3Q5TF21 947 aa12□□□□□ -0.49
SIM1-203ENST00000505753 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
SIM1-203ENST00000505753 PTPRCP08575 1304 aa12□□□□□ -0.49
SIM1-203ENST00000505753 BBOX1O75936 387 aa11.99□□□□□ -0.49
SIM1-203ENST00000505753 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
SIM1-203ENST00000505753 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
SIM1-203ENST00000505753 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
SIM1-203ENST00000505753 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
SIM1-203ENST00000505753 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
SIM1-203ENST00000505753 SLX4Q8IY92 1834 aa11.99□□□□□ -0.49
SIM1-203ENST00000505753 ABCC4O15439 1325 aa11.98□□□□□ -0.49
SIM1-203ENST00000505753 F6X3S4 739 aa11.98□□□□□ -0.49
SIM1-203ENST00000505753 PDE8AO60658 829 aa11.98□□□□□ -0.49
SIM1-203ENST00000505753 RPGRQ92834 1020 aaKnown RBP11.98□□□□□ -0.49
SIM1-203ENST00000505753 CHD4Q14839 1912 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms