RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
SDHA-206ENST00000505555 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
SDHA-206ENST00000505555 ZNF335Q9H4Z2 1342 aaPredicted RBP23.55■■□□□ 1.36
SDHA-206ENST00000505555 PLEKHG2Q9H7P9 1386 aa23.54■■□□□ 1.36
SDHA-206ENST00000505555 PTPN12Q05209 780 aaKnown RBP23.54■■□□□ 1.36
SDHA-206ENST00000505555 CAVIN1Q6NZI2 390 aaKnown RBP23.54■■□□□ 1.36
SDHA-206ENST00000505555 PLBD2Q8NHP8 589 aa23.54■■□□□ 1.36
SDHA-206ENST00000505555 CASTP20810 708 aaKnown RBP23.53■■□□□ 1.36
SDHA-206ENST00000505555 NMIQ13287 307 aaPredicted RBP23.53■■□□□ 1.36
SDHA-206ENST00000505555 ISY1Q9ULR0 285 aaKnown RBP23.53■■□□□ 1.36
SDHA-206ENST00000505555 SOS2Q07890 1332 aaPredicted RBP23.53■■□□□ 1.36
SDHA-206ENST00000505555 ADCK5Q3MIX3 580 aa23.53■■□□□ 1.36
SDHA-206ENST00000505555 TTLL7Q6ZT98 887 aa23.53■■□□□ 1.36
SDHA-206ENST00000505555 COPRSQ9NQ92 184 aa23.53■■□□□ 1.36
SDHA-206ENST00000505555 A1BGP04217 495 aa23.52■■□□□ 1.36
SDHA-206ENST00000505555 TFCP2Q12800 502 aa23.52■■□□□ 1.36
SDHA-206ENST00000505555 RUFY3Q7L099 469 aa23.52■■□□□ 1.36
SDHA-206ENST00000505555 GPT2Q8TD30 523 aa23.52■■□□□ 1.36
SDHA-206ENST00000505555 FOXD4L6Q3SYB3 417 aaPredicted RBP23.52■■□□□ 1.36
SDHA-206ENST00000505555 FOXD4L3Q6VB84 417 aaPredicted RBP23.52■■□□□ 1.36
SDHA-206ENST00000505555 EDC3Q96F86 508 aaKnown RBP23.52■■□□□ 1.36
SDHA-206ENST00000505555 FSD1Q9BTV5 496 aa23.51■■□□□ 1.35
SDHA-206ENST00000505555 GLI3P10071 1580 aa23.51■■□□□ 1.35
SDHA-206ENST00000505555 COL5A2P05997 1499 aaPredicted RBP23.51■■□□□ 1.35
SDHA-206ENST00000505555 CASP7P55210 303 aa23.51■■□□□ 1.35
SDHA-206ENST00000505555 RABL6Q3YEC7 729 aaPredicted RBP23.51■■□□□ 1.35
SDHA-206ENST00000505555 JAKMIP1Q96N16 626 aaKnown RBP23.51■■□□□ 1.35
SDHA-206ENST00000505555 IL2RBP14784 551 aa23.5■■□□□ 1.35
SDHA-206ENST00000505555 CCDC171Q6TFL3 1326 aa23.5■■□□□ 1.35
SDHA-206ENST00000505555 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
SDHA-206ENST00000505555 ERVV-2B6SEH9 535 aa23.49■■□□□ 1.35
SDHA-206ENST00000505555 RBM27Q9P2N5 1060 aaKnown RBP23.49■■□□□ 1.35
SDHA-206ENST00000505555 DBNLQ9UJU6 430 aaKnown RBP23.49■■□□□ 1.35
SDHA-206ENST00000505555 NDUFB9Q9Y6M9 179 aa23.49■■□□□ 1.35
SDHA-206ENST00000505555 NECTIN1Q15223 517 aa23.49■■□□□ 1.35
SDHA-206ENST00000505555 LMBR1LQ6UX01 489 aa23.49■■□□□ 1.35
SDHA-206ENST00000505555 NSFL1CQ9UNZ2 370 aaKnown RBP23.49■■□□□ 1.35
SDHA-206ENST00000505555 LIMCH1Q9UPQ0 1083 aa23.49■■□□□ 1.35
SDHA-206ENST00000505555 DTNBO60941 627 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 EVA1CP58658 441 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 ZSCAN23Q3MJ62 389 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 TNNI3KQ59H18 835 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 ANO8Q9HCE9 1232 aaPredicted RBP23.48■■□□□ 1.35
SDHA-206ENST00000505555 CHMP3Q9Y3E7 222 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 RBM8AQ9Y5S9 174 aaKnown RBP23.48■■□□□ 1.35
SDHA-206ENST00000505555 FPGT-TNNI3KV9GXZ4 949 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 ARFGEF2Q9Y6D5 1785 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
SDHA-206ENST00000505555 AFDNP55196 1824 aaKnown RBP23.48■■□□□ 1.35
SDHA-206ENST00000505555 LARGE1O95461 756 aa23.47■■□□□ 1.35
SDHA-206ENST00000505555 KCNJ4P48050 445 aa23.47■■□□□ 1.35
SDHA-206ENST00000505555 ZBTB3Q9H5J0 574 aa23.47■■□□□ 1.35
SDHA-206ENST00000505555 HIP1O00291 1037 aa23.47■■□□□ 1.35
SDHA-206ENST00000505555 PDRG1Q9NUG6 133 aa23.47■■□□□ 1.35
SDHA-206ENST00000505555 FOXO4P98177 505 aa23.46■■□□□ 1.35
SDHA-206ENST00000505555 NKX1-1Q15270 411 aaPredicted RBP23.46■■□□□ 1.35
SDHA-206ENST00000505555 CREB3L3Q68CJ9 461 aa23.46■■□□□ 1.35
SDHA-206ENST00000505555 MAP4K1Q92918 833 aa23.46■■□□□ 1.35
SDHA-206ENST00000505555 KCNB2Q92953 911 aa23.46■■□□□ 1.35
SDHA-206ENST00000505555 RRAGDQ9NQL2 400 aaPredicted RBP23.46■■□□□ 1.35
SDHA-206ENST00000505555 CCDC9Q9Y3X0 531 aaKnown RBP23.46■■□□□ 1.35
SDHA-206ENST00000505555 H7C1W4 665 aa23.45■■□□□ 1.35
SDHA-206ENST00000505555 COL9A3Q14050 684 aaPredicted RBP23.45■■□□□ 1.35
SDHA-206ENST00000505555 DBNDD2Q9BQY9 259 aa23.45■■□□□ 1.34
SDHA-206ENST00000505555 ZSWIM6Q9HCJ5 1215 aa23.45■■□□□ 1.34
SDHA-206ENST00000505555 PARP4Q9UKK3 1724 aaKnown RBP23.45■■□□□ 1.34
SDHA-206ENST00000505555 ZNF589Q86UQ0 364 aaPredicted RBP23.44■■□□□ 1.34
SDHA-206ENST00000505555 CYP46A1Q9Y6A2 500 aa23.44■■□□□ 1.34
SDHA-206ENST00000505555 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
SDHA-206ENST00000505555 CHGBP05060 677 aa23.44■■□□□ 1.34
SDHA-206ENST00000505555 ATP5JP18859 108 aa23.44■■□□□ 1.34
SDHA-206ENST00000505555 CWC25Q9NXE8 425 aaPredicted RBP23.44■■□□□ 1.34
SDHA-206ENST00000505555 STRCQ7RTU9 1775 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 COL15A1P39059 1388 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 RPAP1Q9BWH6 1393 aaPredicted RBP23.43■■□□□ 1.34
SDHA-206ENST00000505555 ZKSCAN1P17029 563 aaPredicted RBP23.43■■□□□ 1.34
SDHA-206ENST00000505555 ZNF445P59923 1031 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 VPS53Q5VIR6 699 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 GDPD2Q9HCC8 539 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 SLC27A2O14975 620 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 TAF6LQ9Y6J9 622 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 LAMB4A4D0S4 1761 aa23.43■■□□□ 1.34
SDHA-206ENST00000505555 WDR33Q9C0J8 1336 aaKnown RBP23.42■■□□□ 1.34
SDHA-206ENST00000505555 KCPQ6ZWJ8 1503 aa23.42■■□□□ 1.34
SDHA-206ENST00000505555 DNAJC2Q99543 621 aaKnown RBP23.42■■□□□ 1.34
SDHA-206ENST00000505555 TM6SF1Q9BZW5 370 aa23.42■■□□□ 1.34
SDHA-206ENST00000505555 SNRKQ9NRH2 765 aa23.42■■□□□ 1.34
SDHA-206ENST00000505555 TMEM63CQ9P1W3 806 aa23.42■■□□□ 1.34
SDHA-206ENST00000505555 CCDC83Q8IWF9 413 aa23.41■■□□□ 1.34
SDHA-206ENST00000505555 ZNF330Q9Y3S2 320 aaPredicted RBP23.41■■□□□ 1.34
SDHA-206ENST00000505555 SMC3Q9UQE7 1217 aa23.4■■□□□ 1.34
SDHA-206ENST00000505555 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.4■■□□□ 1.34
SDHA-206ENST00000505555 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
SDHA-206ENST00000505555 MED23Q9ULK4 1368 aa23.4■■□□□ 1.34
SDHA-206ENST00000505555 SYT1P21579 422 aa23.39■■□□□ 1.34
SDHA-206ENST00000505555 NASPP49321 788 aaPredicted RBP23.39■■□□□ 1.34
SDHA-206ENST00000505555 ATG9AQ7Z3C6 839 aa23.39■■□□□ 1.34
SDHA-206ENST00000505555 PRIM1P49642 420 aaKnown RBP23.39■■□□□ 1.33
SDHA-206ENST00000505555 NECAB1Q8N987 351 aa23.39■■□□□ 1.33
SDHA-206ENST00000505555 ZNF594Q96JF6 807 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms