RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 MYD88Q99836 296 aa12.96□□□□□ -0.33
RFC1-210ENST00000505077 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
RFC1-210ENST00000505077 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
RFC1-210ENST00000505077 PLIN1O60240 522 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
RFC1-210ENST00000505077 AAMPQ13685 434 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
RFC1-210ENST00000505077 NLRP10Q86W26 655 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 NYXQ9GZU5 481 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
RFC1-210ENST00000505077 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
RFC1-210ENST00000505077 UTYO14607 1347 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
RFC1-210ENST00000505077 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
RFC1-210ENST00000505077 RLBP1P12271 317 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
RFC1-210ENST00000505077 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 ITPRIPQ8IWB1 547 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 TMEM57Q8N5G2 664 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
RFC1-210ENST00000505077 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
RFC1-210ENST00000505077 LRP5O75197 1615 aa12.93□□□□□ -0.34
RFC1-210ENST00000505077 GRM8O00222 908 aa12.93□□□□□ -0.34
RFC1-210ENST00000505077 NEFLP07196 543 aa12.93□□□□□ -0.34
RFC1-210ENST00000505077 GPTP24298 496 aa12.93□□□□□ -0.34
RFC1-210ENST00000505077 GCKRQ14397 625 aa12.93□□□□□ -0.34
RFC1-210ENST00000505077 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
RFC1-210ENST00000505077 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
RFC1-210ENST00000505077 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
RFC1-210ENST00000505077 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
RFC1-210ENST00000505077 PCCAP05165 728 aaPredicted RBP12.92□□□□□ -0.34
RFC1-210ENST00000505077 GNAI3P08754 354 aa12.92□□□□□ -0.34
RFC1-210ENST00000505077 TM4SF1P30408 202 aa12.92□□□□□ -0.34
RFC1-210ENST00000505077 NFIXQ14938 502 aa12.92□□□□□ -0.34
RFC1-210ENST00000505077 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
RFC1-210ENST00000505077 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
RFC1-210ENST00000505077 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
RFC1-210ENST00000505077 KIAA1551Q9HCM1 1747 aa12.91□□□□□ -0.34
RFC1-210ENST00000505077 NTSR2O95665 410 aa12.91□□□□□ -0.34
RFC1-210ENST00000505077 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
RFC1-210ENST00000505077 TPTE2Q6XPS3 522 aa12.91□□□□□ -0.34
RFC1-210ENST00000505077 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
RFC1-210ENST00000505077 UTP14AQ9BVJ6 771 aaKnown RBP12.91□□□□□ -0.34
RFC1-210ENST00000505077 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
RFC1-210ENST00000505077 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
RFC1-210ENST00000505077 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
RFC1-210ENST00000505077 MMP10P09238 476 aa12.9□□□□□ -0.34
RFC1-210ENST00000505077 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
RFC1-210ENST00000505077 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
RFC1-210ENST00000505077 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
RFC1-210ENST00000505077 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
RFC1-210ENST00000505077 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
RFC1-210ENST00000505077 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
RFC1-210ENST00000505077 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 H7C1W4 665 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 POLD1P28340 1107 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 ST5P78524 1137 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 DDR1Q08345 913 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 TAF1P21675 1872 aa12.89□□□□□ -0.35
RFC1-210ENST00000505077 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
RFC1-210ENST00000505077 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
RFC1-210ENST00000505077 NPHP1O15259 732 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 SERPINB2P05120 415 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 MEIS3Q99687 375 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 PLA2G12BQ9BX93 195 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
RFC1-210ENST00000505077 ARFGEF1Q9Y6D6 1849 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
RFC1-210ENST00000505077 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 GNAI2P04899 355 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
RFC1-210ENST00000505077 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
RFC1-210ENST00000505077 CASP7P55210 303 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
RFC1-210ENST00000505077 ABCC12Q96J65 1359 aa12.86□□□□□ -0.35
RFC1-210ENST00000505077 IRS4O14654 1257 aaPredicted RBP12.86□□□□□ -0.35
RFC1-210ENST00000505077 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
RFC1-210ENST00000505077 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
RFC1-210ENST00000505077 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
RFC1-210ENST00000505077 PDE8AO60658 829 aa12.85□□□□□ -0.35
RFC1-210ENST00000505077 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
RFC1-210ENST00000505077 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
RFC1-210ENST00000505077 CTSWP56202 376 aa12.84□□□□□ -0.35
RFC1-210ENST00000505077 MTX1Q13505 466 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms