RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FAM177BA6PVY3 158 aa21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 BTBD11A6QL63 1104 aa21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 CA12O43570 354 aa21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 CST9Q5W186 159 aa21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 USP50Q70EL3 339 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 MCOLN1Q9GZU1 580 aa21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 RSPH6AQ9H0K4 717 aa21.33■■□□□ 1.01
PDLIM7-213ENST00000505074 RGL2O15211 777 aa21.32■■□□□ 1
PDLIM7-213ENST00000505074 EPS15P42566 896 aa21.32■■□□□ 1
PDLIM7-213ENST00000505074 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
PDLIM7-213ENST00000505074 PHACTR3Q96KR7 559 aa21.32■■□□□ 1
PDLIM7-213ENST00000505074 TRAF5O00463 557 aa21.31■■□□□ 1
PDLIM7-213ENST00000505074 KCNQ3O43525 872 aa21.31■■□□□ 1
PDLIM7-213ENST00000505074 AOC2O75106 756 aa21.31■■□□□ 1
PDLIM7-213ENST00000505074 SCNN1DP51172 638 aa21.31■■□□□ 1
PDLIM7-213ENST00000505074 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
PDLIM7-213ENST00000505074 SNED1Q8TER0 1413 aa21.3■■□□□ 1
PDLIM7-213ENST00000505074 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
PDLIM7-213ENST00000505074 COL4A5P29400 1685 aa21.3■■□□□ 1
PDLIM7-213ENST00000505074 LARGE2Q8N3Y3 721 aa21.29■■□□□ 1
PDLIM7-213ENST00000505074 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
PDLIM7-213ENST00000505074 GRIPAP1Q4V328 841 aa21.28■■□□□ 1
PDLIM7-213ENST00000505074 DGKZQ13574 1117 aa21.27■■□□□ 1
PDLIM7-213ENST00000505074 SAPCD2Q86UD0 394 aa21.27■■□□□ 1
PDLIM7-213ENST00000505074 PRAMEF22A3QJZ6 481 aa21.26■□□□□ 0.99
PDLIM7-213ENST00000505074 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-213ENST00000505074 CRY2Q49AN0 593 aa21.26■□□□□ 0.99
PDLIM7-213ENST00000505074 MCM10Q7L590 875 aa21.26■□□□□ 0.99
PDLIM7-213ENST00000505074 NYXQ9GZU5 481 aa21.26■□□□□ 0.99
PDLIM7-213ENST00000505074 CELF2O95319 508 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-213ENST00000505074 NEFMP07197 916 aa21.25■□□□□ 0.99
PDLIM7-213ENST00000505074 NIM1KQ8IY84 436 aa21.25■□□□□ 0.99
PDLIM7-213ENST00000505074 RPGRQ92834 1020 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-213ENST00000505074 HHIPL1Q96JK4 782 aa21.25■□□□□ 0.99
PDLIM7-213ENST00000505074 ADARB2Q9NS39 739 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-213ENST00000505074 HLFQ16534 295 aa21.24■□□□□ 0.99
PDLIM7-213ENST00000505074 NUP98P52948 1817 aa21.24■□□□□ 0.99
PDLIM7-213ENST00000505074 NBPF26B4DH59 902 aa21.23■□□□□ 0.99
PDLIM7-213ENST00000505074 NBPF10Q6P3W6 841 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-213ENST00000505074 NBPF15Q8N660 670 aa21.23■□□□□ 0.99
PDLIM7-213ENST00000505074 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
PDLIM7-213ENST00000505074 DCTN1Q14203 1278 aa21.22■□□□□ 0.99
PDLIM7-213ENST00000505074 GPRC5DQ9NZD1 345 aa21.22■□□□□ 0.99
PDLIM7-213ENST00000505074 TNRC18O15417 2968 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-213ENST00000505074 ABCC12Q96J65 1359 aa21.22■□□□□ 0.99
PDLIM7-213ENST00000505074 HOXA10P31260 410 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-213ENST00000505074 CIAPIN1Q6FI81 312 aa21.21■□□□□ 0.99
PDLIM7-213ENST00000505074 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
PDLIM7-213ENST00000505074 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
PDLIM7-213ENST00000505074 PPEF1O14829 653 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-213ENST00000505074 RBM17Q96I25 401 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-213ENST00000505074 GLIS2Q9BZE0 524 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-213ENST00000505074 TMX4Q9H1E5 349 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-213ENST00000505074 ZNF408Q9H9D4 720 aa21.19■□□□□ 0.98
PDLIM7-213ENST00000505074 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 DLG5Q8TDM6 1919 aa21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 NOGQ13253 232 aa21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 VPS33BQ9H267 617 aa21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 RIC1Q4ADV7 1423 aa21.18■□□□□ 0.98
PDLIM7-213ENST00000505074 PGAP2Q9UHJ9 254 aa21.17■□□□□ 0.98
PDLIM7-213ENST00000505074 ERVV-1B6SEH8 477 aa21.16■□□□□ 0.98
PDLIM7-213ENST00000505074 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-213ENST00000505074 AOC3Q16853 763 aa21.16■□□□□ 0.98
PDLIM7-213ENST00000505074 ZC3H15Q8WU90 426 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-213ENST00000505074 ZNRF3Q9ULT6 936 aa21.16■□□□□ 0.98
PDLIM7-213ENST00000505074 GMPSP49915 693 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-213ENST00000505074 CXCL9Q07325 125 aa21.15■□□□□ 0.98
PDLIM7-213ENST00000505074 CDC37L1Q7L3B6 337 aa21.15■□□□□ 0.98
PDLIM7-213ENST00000505074 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
PDLIM7-213ENST00000505074 IBTKQ9P2D0 1353 aaPredicted RBP21.14■□□□□ 0.98
PDLIM7-213ENST00000505074 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.97
PDLIM7-213ENST00000505074 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
PDLIM7-213ENST00000505074 TAF7Q15545 349 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-213ENST00000505074 SUPT20HQ8NEM7 779 aa21.14■□□□□ 0.97
PDLIM7-213ENST00000505074 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.97
PDLIM7-213ENST00000505074 MAP3K15Q6ZN16 1313 aa21.13■□□□□ 0.97
PDLIM7-213ENST00000505074 BCL2L13Q9BXK5 485 aa21.13■□□□□ 0.97
PDLIM7-213ENST00000505074 AKAP11Q9UKA4 1901 aa21.13■□□□□ 0.97
PDLIM7-213ENST00000505074 GPTP24298 496 aa21.12■□□□□ 0.97
PDLIM7-213ENST00000505074 SOX10P56693 466 aa21.12■□□□□ 0.97
PDLIM7-213ENST00000505074 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
PDLIM7-213ENST00000505074 SLC51AQ86UW1 340 aa21.12■□□□□ 0.97
PDLIM7-213ENST00000505074 HUNKP57058 714 aa21.11■□□□□ 0.97
PDLIM7-213ENST00000505074 TNIP1Q15025 636 aa21.11■□□□□ 0.97
PDLIM7-213ENST00000505074 SUSD4Q5VX71 490 aa21.11■□□□□ 0.97
PDLIM7-213ENST00000505074 ZIC5Q96T25 663 aa21.11■□□□□ 0.97
PDLIM7-213ENST00000505074 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-213ENST00000505074 ATP6V0A2Q9Y487 856 aa21.11■□□□□ 0.97
PDLIM7-213ENST00000505074 UBN2Q6ZU65 1347 aa21.1■□□□□ 0.97
PDLIM7-213ENST00000505074 HIRAP54198 1017 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-213ENST00000505074 SAGE1Q9NXZ1 904 aa21.1■□□□□ 0.97
PDLIM7-213ENST00000505074 KDM3BQ7LBC6 1761 aa21.1■□□□□ 0.97
PDLIM7-213ENST00000505074 NFE2L2Q16236 605 aa21.09■□□□□ 0.97
PDLIM7-213ENST00000505074 PRPF38BQ5VTL8 546 aaKnown RBP21.09■□□□□ 0.97
PDLIM7-213ENST00000505074 PNISRQ8TF01 805 aaKnown RBP21.09■□□□□ 0.97
PDLIM7-213ENST00000505074 NLRP3Q96P20 1036 aa21.09■□□□□ 0.97
PDLIM7-213ENST00000505074 RTFDC1Q9BY42 306 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms