RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 PPP1R42Q7Z4L9 355 aa25.88■■□□□ 1.73
HERC6-205ENST00000504905 WDR90Q96KV7 1748 aa25.88■■□□□ 1.73
HERC6-205ENST00000504905 IBTKQ9P2D0 1353 aaPredicted RBP25.87■■□□□ 1.73
HERC6-205ENST00000504905 CHRNA5P30532 468 aa25.87■■□□□ 1.73
HERC6-205ENST00000504905 PDE6BP35913 854 aa25.87■■□□□ 1.73
HERC6-205ENST00000504905 FSTL1Q12841 308 aa25.87■■□□□ 1.73
HERC6-205ENST00000504905 SUSD4Q5VX71 490 aa25.87■■□□□ 1.73
HERC6-205ENST00000504905 C16orf71Q8IYS4 520 aaPredicted RBP25.87■■□□□ 1.73
HERC6-205ENST00000504905 TRMT2AQ8IZ69 625 aaKnown RBP25.87■■□□□ 1.73
HERC6-205ENST00000504905 DLEC1Q9Y238 1755 aa25.87■■□□□ 1.73
HERC6-205ENST00000504905 KDM2BQ8NHM5 1336 aa25.87■■□□□ 1.73
HERC6-205ENST00000504905 C2CD5Q86YS7 1000 aa25.86■■□□□ 1.73
HERC6-205ENST00000504905 G2E3Q7L622 706 aa25.85■■□□□ 1.73
HERC6-205ENST00000504905 PDZRN3Q9UPQ7 1066 aa25.85■■□□□ 1.73
HERC6-205ENST00000504905 H0YIN7 160 aa25.84■■□□□ 1.73
HERC6-205ENST00000504905 FLIIQ13045 1269 aa25.84■■□□□ 1.73
HERC6-205ENST00000504905 NLRP10Q86W26 655 aa25.84■■□□□ 1.73
HERC6-205ENST00000504905 NUTM1Q86Y26 1132 aa25.84■■□□□ 1.73
HERC6-205ENST00000504905 UTP14AQ9BVJ6 771 aaKnown RBP25.84■■□□□ 1.73
HERC6-205ENST00000504905 RNF181Q9P0P0 153 aa25.84■■□□□ 1.73
HERC6-205ENST00000504905 COL11A2P13942 1736 aaPredicted RBP25.83■■□□□ 1.73
HERC6-205ENST00000504905 NTSR2O95665 410 aa25.83■■□□□ 1.73
HERC6-205ENST00000504905 ATP5J2-PTCD1G3V325 749 aa25.82■■□□□ 1.72
HERC6-205ENST00000504905 ERFEQ4G0M1 354 aa25.82■■□□□ 1.72
HERC6-205ENST00000504905 KSR2Q6VAB6 950 aa25.82■■□□□ 1.72
HERC6-205ENST00000504905 KLRG1Q96E93 195 aa25.82■■□□□ 1.72
HERC6-205ENST00000504905 ISCA1Q9BUE6 129 aa25.82■■□□□ 1.72
HERC6-205ENST00000504905 MAP3K2Q9Y2U5 619 aa25.82■■□□□ 1.72
HERC6-205ENST00000504905 PI4KAP2A4QPH2 592 aa25.81■■□□□ 1.72
HERC6-205ENST00000504905 FKBP5Q13451 457 aaPredicted RBP25.81■■□□□ 1.72
HERC6-205ENST00000504905 PI4KAP1Q8N8J0 262 aa25.81■■□□□ 1.72
HERC6-205ENST00000504905 JMYQ8N9B5 988 aa25.81■■□□□ 1.72
HERC6-205ENST00000504905 MYD88Q99836 296 aa25.81■■□□□ 1.72
HERC6-205ENST00000504905 SBF1O95248 1867 aa25.81■■□□□ 1.72
HERC6-205ENST00000504905 ABCC12Q96J65 1359 aa25.81■■□□□ 1.72
HERC6-205ENST00000504905 METTL22Q9BUU2 404 aaPredicted RBP25.8■■□□□ 1.72
HERC6-205ENST00000504905 RRAGCQ9HB90 399 aa25.8■■□□□ 1.72
HERC6-205ENST00000504905 RNF123Q5XPI4 1314 aa25.8■■□□□ 1.72
HERC6-205ENST00000504905 ZBED9Q6R2W3 1325 aa25.8■■□□□ 1.72
HERC6-205ENST00000504905 ZNF428Q96B54 188 aa25.79■■□□□ 1.72
HERC6-205ENST00000504905 TRMT112Q9UI30 125 aaKnown RBP25.79■■□□□ 1.72
HERC6-205ENST00000504905 TNRC6CQ9HCJ0 1690 aaKnown RBP25.79■■□□□ 1.72
HERC6-205ENST00000504905 CT47B1P0C2W7 299 aaPredicted RBP25.78■■□□□ 1.72
HERC6-205ENST00000504905 HTRA3P83110 453 aa25.78■■□□□ 1.72
HERC6-205ENST00000504905 TRIM28Q13263 835 aaKnown RBP25.78■■□□□ 1.72
HERC6-205ENST00000504905 ZNF622Q969S3 477 aaKnown RBP eCLIP25.78■■□□□ 1.72
HERC6-205ENST00000504905 ZC3H4Q9UPT8 1303 aaKnown RBP25.78■■□□□ 1.72
HERC6-205ENST00000504905 NEXNQ0ZGT2 675 aa25.77■■□□□ 1.72
HERC6-205ENST00000504905 RIC1Q4ADV7 1423 aa25.77■■□□□ 1.72
HERC6-205ENST00000504905 CACNA1SQ13698 1873 aa25.77■■□□□ 1.72
HERC6-205ENST00000504905 SRGNP10124 158 aa25.76■■□□□ 1.71
HERC6-205ENST00000504905 TTLL6Q8N841 843 aa25.76■■□□□ 1.71
HERC6-205ENST00000504905 MASTLQ96GX5 879 aa25.76■■□□□ 1.71
HERC6-205ENST00000504905 SH3TC1Q8TE82 1336 aa25.76■■□□□ 1.71
HERC6-205ENST00000504905 KLRG2A4D1S0 409 aaPredicted RBP25.75■■□□□ 1.71
HERC6-205ENST00000504905 STYK1Q6J9G0 422 aa25.75■■□□□ 1.71
HERC6-205ENST00000504905 CCDC191Q8NCU4 936 aa25.75■■□□□ 1.71
HERC6-205ENST00000504905 NPR1P16066 1061 aa25.74■■□□□ 1.71
HERC6-205ENST00000504905 ALDH1L2Q3SY69 923 aa25.74■■□□□ 1.71
HERC6-205ENST00000504905 MRPL50Q8N5N7 158 aaKnown RBP25.74■■□□□ 1.71
HERC6-205ENST00000504905 SMC1BQ8NDV3 1235 aa25.74■■□□□ 1.71
HERC6-205ENST00000504905 DNAAF4Q8WXU2 420 aa25.74■■□□□ 1.71
HERC6-205ENST00000504905 SSH1Q8WYL5 1049 aa25.74■■□□□ 1.71
HERC6-205ENST00000504905 CWC25Q9NXE8 425 aaPredicted RBP25.74■■□□□ 1.71
HERC6-205ENST00000504905 SLC10A5Q5PT55 438 aa25.73■■□□□ 1.71
HERC6-205ENST00000504905 CNKSR1Q969H4 720 aa25.73■■□□□ 1.71
HERC6-205ENST00000504905 SYNE4Q8N205 404 aa25.72■■□□□ 1.71
HERC6-205ENST00000504905 FAM89AQ96GI7 184 aa25.72■■□□□ 1.71
HERC6-205ENST00000504905 NLRP3Q96P20 1036 aa25.72■■□□□ 1.71
HERC6-205ENST00000504905 BCL2L13Q9BXK5 485 aa25.72■■□□□ 1.71
HERC6-205ENST00000504905 LAMB2P55268 1798 aa25.72■■□□□ 1.71
HERC6-205ENST00000504905 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
HERC6-205ENST00000504905 IGKV5-2P06315 115 aa25.71■■□□□ 1.71
HERC6-205ENST00000504905 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
HERC6-205ENST00000504905 LMNB1P20700 586 aa25.71■■□□□ 1.71
HERC6-205ENST00000504905 RASSF7Q02833 373 aa25.71■■□□□ 1.71
HERC6-205ENST00000504905 CRY2Q49AN0 593 aa25.71■■□□□ 1.71
HERC6-205ENST00000504905 SMC4Q9NTJ3 1288 aa25.71■■□□□ 1.71
HERC6-205ENST00000504905 F6X3S4 739 aa25.7■■□□□ 1.7
HERC6-205ENST00000504905 RTL5Q5HYW3 569 aaPredicted RBP25.7■■□□□ 1.7
HERC6-205ENST00000504905 ZBTB38Q8NAP3 1195 aaPredicted RBP25.7■■□□□ 1.7
HERC6-205ENST00000504905 RPGRQ92834 1020 aaKnown RBP25.7■■□□□ 1.7
HERC6-205ENST00000504905 GLTPD2A6NH11 291 aa25.69■■□□□ 1.7
HERC6-205ENST00000504905 CWF19L2Q2TBE0 894 aaKnown RBP25.69■■□□□ 1.7
HERC6-205ENST00000504905 COL13A1Q5TAT6 717 aaPredicted RBP25.69■■□□□ 1.7
HERC6-205ENST00000504905 SLX4Q8IY92 1834 aa25.69■■□□□ 1.7
HERC6-205ENST00000504905 NEURL1BA8MQ27 555 aa25.68■■□□□ 1.7
HERC6-205ENST00000504905 VEGFAP15692 232 aaPredicted RBP25.68■■□□□ 1.7
HERC6-205ENST00000504905 PRELPP51888 382 aa25.68■■□□□ 1.7
HERC6-205ENST00000504905 C3orf67Q6ZVT6 689 aa25.68■■□□□ 1.7
HERC6-205ENST00000504905 PTPRCP08575 1304 aa25.67■■□□□ 1.7
HERC6-205ENST00000504905 IRS4O14654 1257 aaPredicted RBP25.67■■□□□ 1.7
HERC6-205ENST00000504905 PCCAP05165 728 aaPredicted RBP25.67■■□□□ 1.7
HERC6-205ENST00000504905 ALDH1B1P30837 517 aa25.67■■□□□ 1.7
HERC6-205ENST00000504905 PRPF40BQ6NWY9 871 aaKnown RBP25.67■■□□□ 1.7
HERC6-205ENST00000504905 LINS1Q8NG48 757 aa25.67■■□□□ 1.7
HERC6-205ENST00000504905 PCNTO95613 3336 aa25.66■■□□□ 1.7
HERC6-205ENST00000504905 HSP90B1P14625 803 aaKnown RBP25.66■■□□□ 1.7
HERC6-205ENST00000504905 RBM17Q96I25 401 aaKnown RBP25.66■■□□□ 1.7
HERC6-205ENST00000504905 HOXA10P31260 410 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms