RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 USP50Q70EL3 339 aaPredicted RBP12.22□□□□□ -0.45
PDGFC-204ENST00000504672 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
PDGFC-204ENST00000504672 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
PDGFC-204ENST00000504672 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
PDGFC-204ENST00000504672 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
PDGFC-204ENST00000504672 NGEFQ8N5V2 710 aa12.21□□□□□ -0.45
PDGFC-204ENST00000504672 NBPF15Q8N660 670 aa12.21□□□□□ -0.45
PDGFC-204ENST00000504672 PSMD1Q99460 953 aa12.21□□□□□ -0.45
PDGFC-204ENST00000504672 ZNF652Q9Y2D9 606 aa12.21□□□□□ -0.45
PDGFC-204ENST00000504672 ADAMTSL1Q8N6G6 1762 aa12.2□□□□□ -0.46
PDGFC-204ENST00000504672 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
PDGFC-204ENST00000504672 COL4A5P29400 1685 aa12.19□□□□□ -0.46
PDGFC-204ENST00000504672 CA12O43570 354 aa12.19□□□□□ -0.46
PDGFC-204ENST00000504672 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
PDGFC-204ENST00000504672 GMPSP49915 693 aaPredicted RBP12.18□□□□□ -0.46
PDGFC-204ENST00000504672 CXCL9Q07325 125 aa12.18□□□□□ -0.46
PDGFC-204ENST00000504672 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
PDGFC-204ENST00000504672 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
PDGFC-204ENST00000504672 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
PDGFC-204ENST00000504672 RPGRQ92834 1020 aaKnown RBP12.18□□□□□ -0.46
PDGFC-204ENST00000504672 PHACTR3Q96KR7 559 aa12.18□□□□□ -0.46
PDGFC-204ENST00000504672 ADARB2Q9NS39 739 aaKnown RBP12.18□□□□□ -0.46
PDGFC-204ENST00000504672 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
PDGFC-204ENST00000504672 CACNA1SQ13698 1873 aa12.18□□□□□ -0.46
PDGFC-204ENST00000504672 PPIP5K2O43314 1243 aa12.17□□□□□ -0.46
PDGFC-204ENST00000504672 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
PDGFC-204ENST00000504672 HIRAP54198 1017 aaPredicted RBP12.17□□□□□ -0.46
PDGFC-204ENST00000504672 AOC3Q16853 763 aa12.17□□□□□ -0.46
PDGFC-204ENST00000504672 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
PDGFC-204ENST00000504672 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
PDGFC-204ENST00000504672 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
PDGFC-204ENST00000504672 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
PDGFC-204ENST00000504672 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
PDGFC-204ENST00000504672 GPTP24298 496 aa12.16□□□□□ -0.46
PDGFC-204ENST00000504672 HUNKP57058 714 aa12.16□□□□□ -0.46
PDGFC-204ENST00000504672 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDGFC-204ENST00000504672 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
PDGFC-204ENST00000504672 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
PDGFC-204ENST00000504672 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
PDGFC-204ENST00000504672 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
PDGFC-204ENST00000504672 TRPA1O75762 1119 aa12.15□□□□□ -0.46
PDGFC-204ENST00000504672 RAD17O75943 681 aa12.15□□□□□ -0.46
PDGFC-204ENST00000504672 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
PDGFC-204ENST00000504672 MCM10Q7L590 875 aa12.15□□□□□ -0.46
PDGFC-204ENST00000504672 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
PDGFC-204ENST00000504672 CASP8AP2Q9UKL3 1982 aa12.15□□□□□ -0.46
PDGFC-204ENST00000504672 SCN7AQ01118 1682 aa12.15□□□□□ -0.46
PDGFC-204ENST00000504672 SNED1Q8TER0 1413 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
PDGFC-204ENST00000504672 NOGQ13253 232 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 TRPM4Q8TD43 1214 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 RBM17Q96I25 401 aaKnown RBP12.14□□□□□ -0.47
PDGFC-204ENST00000504672 HHIPL1Q96JK4 782 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 NPC1L1Q9UHC9 1359 aa12.14□□□□□ -0.47
PDGFC-204ENST00000504672 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
PDGFC-204ENST00000504672 PDE4DIPQ5VU43 2346 aa12.13□□□□□ -0.47
PDGFC-204ENST00000504672 PRPF38BQ5VTL8 546 aaKnown RBP12.13□□□□□ -0.47
PDGFC-204ENST00000504672 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
PDGFC-204ENST00000504672 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
PDGFC-204ENST00000504672 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
PDGFC-204ENST00000504672 RNF186Q9NXI6 227 aa12.13□□□□□ -0.47
PDGFC-204ENST00000504672 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
PDGFC-204ENST00000504672 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
PDGFC-204ENST00000504672 NYXQ9GZU5 481 aa12.12□□□□□ -0.47
PDGFC-204ENST00000504672 CNOT7Q9UIV1 285 aaKnown RBP12.12□□□□□ -0.47
PDGFC-204ENST00000504672 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
PDGFC-204ENST00000504672 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
PDGFC-204ENST00000504672 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
PDGFC-204ENST00000504672 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
PDGFC-204ENST00000504672 RBM26Q5T8P6 1007 aaKnown RBP12.11□□□□□ -0.47
PDGFC-204ENST00000504672 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
PDGFC-204ENST00000504672 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
PDGFC-204ENST00000504672 TMX4Q9H1E5 349 aaPredicted RBP12.11□□□□□ -0.47
PDGFC-204ENST00000504672 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
PDGFC-204ENST00000504672 MYL6BP14649 208 aa12.1□□□□□ -0.47
PDGFC-204ENST00000504672 ZNF157P51786 506 aaPredicted RBP12.1□□□□□ -0.47
PDGFC-204ENST00000504672 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
PDGFC-204ENST00000504672 ZC3H15Q8WU90 426 aaKnown RBP12.1□□□□□ -0.47
PDGFC-204ENST00000504672 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
PDGFC-204ENST00000504672 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
PDGFC-204ENST00000504672 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
PDGFC-204ENST00000504672 UBN2Q6ZU65 1347 aa12.1□□□□□ -0.47
PDGFC-204ENST00000504672 H7C1D1 291 aa12.09□□□□□ -0.47
PDGFC-204ENST00000504672 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
PDGFC-204ENST00000504672 DPP8Q6V1X1 898 aaPredicted RBP12.09□□□□□ -0.47
PDGFC-204ENST00000504672 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
PDGFC-204ENST00000504672 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
PDGFC-204ENST00000504672 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
PDGFC-204ENST00000504672 ERVV-1B6SEH8 477 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 RGL2O15211 777 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 EGFRP00533 1210 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 TNIP1Q15025 636 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms