RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
TPM3-217ENST00000504663 LRP5O75197 1615 aa13.05□□□□□ -0.32
TPM3-217ENST00000504663 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
TPM3-217ENST00000504663 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
TPM3-217ENST00000504663 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
TPM3-217ENST00000504663 DCTPP1Q9H773 170 aa13.04□□□□□ -0.32
TPM3-217ENST00000504663 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
TPM3-217ENST00000504663 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
TPM3-217ENST00000504663 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
TPM3-217ENST00000504663 PDE4AP27815 886 aa13.03□□□□□ -0.32
TPM3-217ENST00000504663 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
TPM3-217ENST00000504663 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
TPM3-217ENST00000504663 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
TPM3-217ENST00000504663 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
TPM3-217ENST00000504663 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
TPM3-217ENST00000504663 COL4A1P02462 1669 aa13.02□□□□□ -0.32
TPM3-217ENST00000504663 PLSCR1O15162 318 aa13.02□□□□□ -0.33
TPM3-217ENST00000504663 RGL2O15211 777 aa13.02□□□□□ -0.33
TPM3-217ENST00000504663 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
TPM3-217ENST00000504663 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
TPM3-217ENST00000504663 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
TPM3-217ENST00000504663 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
TPM3-217ENST00000504663 JARID2Q92833 1246 aaPredicted RBP13.02□□□□□ -0.33
TPM3-217ENST00000504663 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
TPM3-217ENST00000504663 ZNF330Q9Y3S2 320 aaPredicted RBP13.02□□□□□ -0.33
TPM3-217ENST00000504663 FOXO4P98177 505 aa13.01□□□□□ -0.33
TPM3-217ENST00000504663 NUCB1Q02818 461 aa13.01□□□□□ -0.33
TPM3-217ENST00000504663 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
TPM3-217ENST00000504663 BICC1Q9H694 974 aaKnown RBP13.01□□□□□ -0.33
TPM3-217ENST00000504663 TNRC6CQ9HCJ0 1690 aaKnown RBP13.01□□□□□ -0.33
TPM3-217ENST00000504663 GNPATO15228 680 aa13□□□□□ -0.33
TPM3-217ENST00000504663 RFX5P48382 616 aaPredicted RBP13□□□□□ -0.33
TPM3-217ENST00000504663 ZNF827Q17R98 1081 aa13□□□□□ -0.33
TPM3-217ENST00000504663 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
TPM3-217ENST00000504663 GCC1Q96CN9 775 aa13□□□□□ -0.33
TPM3-217ENST00000504663 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
TPM3-217ENST00000504663 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
TPM3-217ENST00000504663 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
TPM3-217ENST00000504663 A0A087WZG4 1122 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
TPM3-217ENST00000504663 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
TPM3-217ENST00000504663 NARFQ9UHQ1 456 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 A0A1B0GUL6 1792 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
TPM3-217ENST00000504663 SALL3Q9BXA9 1300 aa12.98□□□□□ -0.33
TPM3-217ENST00000504663 NTSR2O95665 410 aa12.98□□□□□ -0.33
TPM3-217ENST00000504663 GPTP24298 496 aa12.98□□□□□ -0.33
TPM3-217ENST00000504663 SYNE4Q8N205 404 aa12.98□□□□□ -0.33
TPM3-217ENST00000504663 APBA3O96018 575 aa12.97□□□□□ -0.33
TPM3-217ENST00000504663 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
TPM3-217ENST00000504663 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
TPM3-217ENST00000504663 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
TPM3-217ENST00000504663 CAMKK2Q96RR4 588 aa12.97□□□□□ -0.33
TPM3-217ENST00000504663 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
TPM3-217ENST00000504663 SRGAP3O43295 1099 aa12.96□□□□□ -0.33
TPM3-217ENST00000504663 HMMRO75330 724 aa12.96□□□□□ -0.33
TPM3-217ENST00000504663 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
TPM3-217ENST00000504663 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
TPM3-217ENST00000504663 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
TPM3-217ENST00000504663 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.33
TPM3-217ENST00000504663 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
TPM3-217ENST00000504663 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 SSFA2P28290 1259 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 AK7Q96M32 723 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
TPM3-217ENST00000504663 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.95□□□□□ -0.34
TPM3-217ENST00000504663 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
TPM3-217ENST00000504663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
TPM3-217ENST00000504663 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
TPM3-217ENST00000504663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
TPM3-217ENST00000504663 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
TPM3-217ENST00000504663 CSF1RP07333 972 aa12.94□□□□□ -0.34
TPM3-217ENST00000504663 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
TPM3-217ENST00000504663 RTL5Q5HYW3 569 aaPredicted RBP12.94□□□□□ -0.34
TPM3-217ENST00000504663 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
TPM3-217ENST00000504663 ANKRD31Q8N7Z5 1873 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 PHF14O94880 888 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 RGS3P49796 1198 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
TPM3-217ENST00000504663 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
TPM3-217ENST00000504663 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM3-217ENST00000504663 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
TPM3-217ENST00000504663 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
TPM3-217ENST00000504663 GYS1P13807 737 aa12.92□□□□□ -0.34
TPM3-217ENST00000504663 C16orf71Q8IYS4 520 aaPredicted RBP12.92□□□□□ -0.34
TPM3-217ENST00000504663 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
TPM3-217ENST00000504663 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
TPM3-217ENST00000504663 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
TPM3-217ENST00000504663 ARXQ96QS3 562 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms