RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
UBE2B-204ENST00000504431 CCDC141Q6ZP82 1450 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 SCG3Q8WXD2 468 aaKnown RBP11.28□□□□□ -0.6
UBE2B-204ENST00000504431 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
UBE2B-204ENST00000504431 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 INO80Q9ULG1 1556 aaPredicted RBP11.28□□□□□ -0.6
UBE2B-204ENST00000504431 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
UBE2B-204ENST00000504431 ABCC5O15440 1437 aa11.27□□□□□ -0.6
UBE2B-204ENST00000504431 C9orf84Q5VXU9 1444 aa11.27□□□□□ -0.6
UBE2B-204ENST00000504431 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
UBE2B-204ENST00000504431 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
UBE2B-204ENST00000504431 WDR44Q5JSH3 913 aa11.27□□□□□ -0.61
UBE2B-204ENST00000504431 C1orf216Q8TAB5 229 aa11.27□□□□□ -0.61
UBE2B-204ENST00000504431 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
UBE2B-204ENST00000504431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.612e-9■■■■■ 78.9
UBE2B-204ENST00000504431 CABP1Q9NZU7 370 aa11.27□□□□□ -0.61
UBE2B-204ENST00000504431 IQSEC3Q9UPP2 1182 aaPredicted RBP11.27□□□□□ -0.61
UBE2B-204ENST00000504431 ARHGEF5Q12774 1597 aa11.26□□□□□ -0.61
UBE2B-204ENST00000504431 OCLNQ16625 522 aa11.26□□□□□ -0.61
UBE2B-204ENST00000504431 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.26□□□□□ -0.61
UBE2B-204ENST00000504431 TAS1R3Q7RTX0 852 aa11.26□□□□□ -0.61
UBE2B-204ENST00000504431 RRP7BPQ9NSQ0 103 aa11.26□□□□□ -0.61
UBE2B-204ENST00000504431 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
UBE2B-204ENST00000504431 MAN1A2O60476 641 aa11.25□□□□□ -0.61
UBE2B-204ENST00000504431 SSFA2P28290 1259 aa11.25□□□□□ -0.61
UBE2B-204ENST00000504431 TEAD4Q15561 434 aa11.25□□□□□ -0.61
UBE2B-204ENST00000504431 PRIMPOLQ96LW4 560 aa11.25□□□□□ -0.61
UBE2B-204ENST00000504431 BCORL1Q5H9F3 1711 aa11.25□□□□□ -0.61
UBE2B-204ENST00000504431 DAPK1P53355 1430 aa11.25□□□□□ -0.61
UBE2B-204ENST00000504431 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
UBE2B-204ENST00000504431 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
UBE2B-204ENST00000504431 SERTM1A2A2V5 107 aa11.24□□□□□ -0.61
UBE2B-204ENST00000504431 CARNS1A5YM72 827 aa11.24□□□□□ -0.61
UBE2B-204ENST00000504431 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
UBE2B-204ENST00000504431 GGT6Q6P531 493 aa11.24□□□□□ -0.61
UBE2B-204ENST00000504431 CEBPAP49715 358 aaPredicted RBP11.23□□□□□ -0.61
UBE2B-204ENST00000504431 KCNA1Q09470 495 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
UBE2B-204ENST00000504431 PRICKLE2Q7Z3G6 844 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 COL26A1Q96A83 441 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 A2MP01023 1474 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
UBE2B-204ENST00000504431 ADAMTSL3P82987 1691 aa11.23□□□□□ -0.61
UBE2B-204ENST00000504431 FIGNL2A6NMB9 653 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 CROCC2H7BZ55 1655 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 KIF3BO15066 747 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 C21orf2O43822 256 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 LGR5O75473 907 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
UBE2B-204ENST00000504431 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 TBCELQ5QJ74 424 aa11.22□□□□□ -0.61
UBE2B-204ENST00000504431 RIMS1Q86UR5 1692 aaKnown RBP11.22□□□□□ -0.61
UBE2B-204ENST00000504431 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.61
UBE2B-204ENST00000504431 NOS2P35228 1153 aa11.21□□□□□ -0.61
UBE2B-204ENST00000504431 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
UBE2B-204ENST00000504431 C4orf17Q53FE4 359 aa11.21□□□□□ -0.61
UBE2B-204ENST00000504431 C2orf49Q9BVC5 232 aaPredicted RBP11.21□□□□□ -0.61
UBE2B-204ENST00000504431 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
UBE2B-204ENST00000504431 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
UBE2B-204ENST00000504431 POU4F2Q12837 409 aa11.2□□□□□ -0.62
UBE2B-204ENST00000504431 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
UBE2B-204ENST00000504431 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
UBE2B-204ENST00000504431 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
UBE2B-204ENST00000504431 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
UBE2B-204ENST00000504431 FER1L4A9Z1Z3 1794 aa11.2□□□□□ -0.62
UBE2B-204ENST00000504431 MAST1Q9Y2H9 1570 aa11.2□□□□□ -0.62
UBE2B-204ENST00000504431 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
UBE2B-204ENST00000504431 A0A1B0GTH6 734 aa11.19□□□□□ -0.62
UBE2B-204ENST00000504431 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
UBE2B-204ENST00000504431 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
UBE2B-204ENST00000504431 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
UBE2B-204ENST00000504431 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
UBE2B-204ENST00000504431 ZDHHC3Q9NYG2 299 aa11.19□□□□□ -0.62
UBE2B-204ENST00000504431 GMPR2Q9P2T1 348 aaKnown RBP11.19□□□□□ -0.62
UBE2B-204ENST00000504431 EML1O00423 815 aa11.18□□□□□ -0.62
UBE2B-204ENST00000504431 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
UBE2B-204ENST00000504431 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
UBE2B-204ENST00000504431 REREQ9P2R6 1566 aa11.18□□□□□ -0.62
UBE2B-204ENST00000504431 PTPRMP28827 1452 aa11.18□□□□□ -0.62
UBE2B-204ENST00000504431 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
UBE2B-204ENST00000504431 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
UBE2B-204ENST00000504431 PHKA2P46019 1235 aa11.17□□□□□ -0.62
UBE2B-204ENST00000504431 ZDHHC1Q8WTX9 485 aa11.17□□□□□ -0.62
UBE2B-204ENST00000504431 GPC6Q9Y625 555 aaPredicted RBP11.17□□□□□ -0.62
UBE2B-204ENST00000504431 AGLP35573 1532 aa11.17□□□□□ -0.62
UBE2B-204ENST00000504431 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
UBE2B-204ENST00000504431 RHOQP17081 205 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 PHLDB3Q6NSJ2 640 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 DYRK1BQ9Y463 629 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 SHANK2Q9UPX8 1470 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms