RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 UTRNP46939 3433 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 CARMIL3Q8ND23 1372 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 NEURL1BA8MQ27 555 aa16.84■□□□□ 0.29
PDLIM7-212ENST00000504380 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-212ENST00000504380 NPHP1O15259 732 aa16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 NTSR2O95665 410 aa16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 ERFEQ4G0M1 354 aa16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 PARP10Q53GL7 1025 aa16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 PRR5LQ6MZQ0 368 aa16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 ARHGAP45Q92619 1136 aa16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 UTP14AQ9BVJ6 771 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-212ENST00000504380 RLBP1P12271 317 aa16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 TRIM28Q13263 835 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 CCDC191Q8NCU4 936 aa16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 LINS1Q8NG48 757 aa16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 FAM89AQ96GI7 184 aa16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 TRMT112Q9UI30 125 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-212ENST00000504380 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 GCKRQ14397 625 aa16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 TPTE2Q6XPS3 522 aa16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 PANK1Q8TE04 598 aa16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 NRXN2Q9P2S2 1712 aa16.81■□□□□ 0.28
PDLIM7-212ENST00000504380 ABCC12Q96J65 1359 aa16.8■□□□□ 0.28
PDLIM7-212ENST00000504380 ABCC4O15439 1325 aa16.8■□□□□ 0.28
PDLIM7-212ENST00000504380 HCLS1P14317 486 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-212ENST00000504380 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
PDLIM7-212ENST00000504380 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
PDLIM7-212ENST00000504380 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-212ENST00000504380 NYXQ9GZU5 481 aa16.79■□□□□ 0.28
PDLIM7-212ENST00000504380 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-212ENST00000504380 ALDH1L1O75891 902 aa16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 ST5P78524 1137 aa16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-212ENST00000504380 SH3TC1Q8TE82 1336 aa16.77■□□□□ 0.28
PDLIM7-212ENST00000504380 H7C1W4 665 aa16.77■□□□□ 0.28
PDLIM7-212ENST00000504380 PCCAP05165 728 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-212ENST00000504380 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-212ENST00000504380 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-212ENST00000504380 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.28
PDLIM7-212ENST00000504380 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.27
PDLIM7-212ENST00000504380 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
PDLIM7-212ENST00000504380 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.27
PDLIM7-212ENST00000504380 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 CHRNA5P30532 468 aa16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 CASP7P55210 303 aa16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 WWC3Q9ULE0 1092 aa16.76■□□□□ 0.27
PDLIM7-212ENST00000504380 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 GRM8O00222 908 aa16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 NBPF7P0C2Y1 421 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
PDLIM7-212ENST00000504380 DPEP1P16444 411 aa16.74■□□□□ 0.27
PDLIM7-212ENST00000504380 SLC10A5Q5PT55 438 aa16.74■□□□□ 0.27
PDLIM7-212ENST00000504380 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-212ENST00000504380 MEIS3Q99687 375 aa16.74■□□□□ 0.27
PDLIM7-212ENST00000504380 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-212ENST00000504380 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-212ENST00000504380 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
PDLIM7-212ENST00000504380 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
PDLIM7-212ENST00000504380 SUCLG2Q96I99 432 aa16.73■□□□□ 0.27
PDLIM7-212ENST00000504380 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
PDLIM7-212ENST00000504380 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
PDLIM7-212ENST00000504380 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
PDLIM7-212ENST00000504380 LAMB2P55268 1798 aa16.72■□□□□ 0.27
PDLIM7-212ENST00000504380 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
PDLIM7-212ENST00000504380 KIAA1551Q9HCM1 1747 aa16.71■□□□□ 0.27
PDLIM7-212ENST00000504380 PDE8AO60658 829 aa16.71■□□□□ 0.27
PDLIM7-212ENST00000504380 MS4A1P11836 297 aa16.71■□□□□ 0.27
PDLIM7-212ENST00000504380 PDE6BP35913 854 aa16.71■□□□□ 0.27
PDLIM7-212ENST00000504380 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
PDLIM7-212ENST00000504380 UTYO14607 1347 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 H0YIN7 160 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 KCNA3P22001 575 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 FOXO4P98177 505 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 PDE3AQ14432 1141 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 KAZALD1Q96I82 304 aa16.7■□□□□ 0.26
PDLIM7-212ENST00000504380 CHD4Q14839 1912 aa16.69■□□□□ 0.26
PDLIM7-212ENST00000504380 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-212ENST00000504380 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-212ENST00000504380 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms