RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 MEIS3Q99687 375 aa17.41■□□□□ 0.38
CYSTM1-202ENST00000504227 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
CYSTM1-202ENST00000504227 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
CYSTM1-202ENST00000504227 H7C1W4 665 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 NFIXQ14938 502 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 R3HDM1Q15032 1099 aaKnown RBP17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 ZBTB40Q9NUA8 1239 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 UBN2Q6ZU65 1347 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
CYSTM1-202ENST00000504227 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 FAM177BA6PVY3 158 aa17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 PCCAP05165 728 aaPredicted RBP17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 TM4SF1P30408 202 aa17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 ZBTB38Q8NAP3 1195 aaPredicted RBP17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 NYXQ9GZU5 481 aa17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 UTYO14607 1347 aa17.39■□□□□ 0.37
CYSTM1-202ENST00000504227 GNAI2P04899 355 aa17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 TPTE2Q6XPS3 522 aa17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 QSER1Q2KHR3 1735 aa17.38■□□□□ 0.37
CYSTM1-202ENST00000504227 NPHP1O15259 732 aa17.37■□□□□ 0.37
CYSTM1-202ENST00000504227 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
CYSTM1-202ENST00000504227 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
CYSTM1-202ENST00000504227 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
CYSTM1-202ENST00000504227 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
CYSTM1-202ENST00000504227 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
CYSTM1-202ENST00000504227 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 N4BP2Q86UW6 1770 aaPredicted RBP17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 NTSR2O95665 410 aa17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 SERPINB2P05120 415 aa17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 MMP10P09238 476 aa17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 PDGFDQ9GZP0 370 aaPredicted RBP17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 PARP3Q9Y6F1 533 aa17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
CYSTM1-202ENST00000504227 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
CYSTM1-202ENST00000504227 SOCS7O14512 581 aa17.35■□□□□ 0.37
CYSTM1-202ENST00000504227 CASP7P55210 303 aa17.35■□□□□ 0.37
CYSTM1-202ENST00000504227 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
CYSTM1-202ENST00000504227 PSDA5PKW4 1024 aaPredicted RBP17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 POLRMTO00411 1230 aaKnown RBP17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 DDR1Q08345 913 aa17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 C1orf115Q9H7X2 142 aa17.34■□□□□ 0.37
CYSTM1-202ENST00000504227 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
CYSTM1-202ENST00000504227 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.36
CYSTM1-202ENST00000504227 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
CYSTM1-202ENST00000504227 CNBD1Q8NA66 436 aa17.33■□□□□ 0.36
CYSTM1-202ENST00000504227 PDE8AO60658 829 aa17.32■□□□□ 0.36
CYSTM1-202ENST00000504227 SLC10A5Q5PT55 438 aa17.32■□□□□ 0.36
CYSTM1-202ENST00000504227 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
CYSTM1-202ENST00000504227 PLA2G12BQ9BX93 195 aa17.32■□□□□ 0.36
CYSTM1-202ENST00000504227 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
CYSTM1-202ENST00000504227 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
CYSTM1-202ENST00000504227 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
CYSTM1-202ENST00000504227 ST5P78524 1137 aa17.31■□□□□ 0.36
CYSTM1-202ENST00000504227 BICC1Q9H694 974 aaKnown RBP17.31■□□□□ 0.36
CYSTM1-202ENST00000504227 PCDHB15Q9Y5E8 787 aa17.31■□□□□ 0.36
CYSTM1-202ENST00000504227 GTF3C3Q9Y5Q9 886 aa17.31■□□□□ 0.36
CYSTM1-202ENST00000504227 FOXO4P98177 505 aa17.3■□□□□ 0.36
CYSTM1-202ENST00000504227 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
CYSTM1-202ENST00000504227 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
CYSTM1-202ENST00000504227 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
CYSTM1-202ENST00000504227 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
CYSTM1-202ENST00000504227 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
CYSTM1-202ENST00000504227 POLD1P28340 1107 aa17.29■□□□□ 0.36
CYSTM1-202ENST00000504227 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
CYSTM1-202ENST00000504227 CEP85Q6P2H3 762 aa17.29■□□□□ 0.36
CYSTM1-202ENST00000504227 LMBR1LQ6UX01 489 aa17.29■□□□□ 0.36
CYSTM1-202ENST00000504227 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
CYSTM1-202ENST00000504227 HMMRO75330 724 aa17.28■□□□□ 0.36
CYSTM1-202ENST00000504227 CTSWP56202 376 aa17.28■□□□□ 0.36
CYSTM1-202ENST00000504227 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
CYSTM1-202ENST00000504227 CCDC24Q8N4L8 307 aa17.28■□□□□ 0.36
CYSTM1-202ENST00000504227 NLRP3Q96P20 1036 aa17.28■□□□□ 0.36
CYSTM1-202ENST00000504227 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
CYSTM1-202ENST00000504227 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
CYSTM1-202ENST00000504227 CSF1RP07333 972 aa17.27■□□□□ 0.36
CYSTM1-202ENST00000504227 MTX1Q13505 466 aa17.27■□□□□ 0.36
CYSTM1-202ENST00000504227 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.36
CYSTM1-202ENST00000504227 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
CYSTM1-202ENST00000504227 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
CYSTM1-202ENST00000504227 TTLL11Q8NHH1 800 aa17.26■□□□□ 0.35
CYSTM1-202ENST00000504227 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
CYSTM1-202ENST00000504227 BRIP1Q9BX63 1249 aa17.26■□□□□ 0.35
CYSTM1-202ENST00000504227 ABCC12Q96J65 1359 aa17.26■□□□□ 0.35
CYSTM1-202ENST00000504227 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
CYSTM1-202ENST00000504227 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
CYSTM1-202ENST00000504227 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CYSTM1-202ENST00000504227 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
CYSTM1-202ENST00000504227 PDE6BP35913 854 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms