RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 HYPKQ9NX55 129 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 KCNQ2O43526 872 aa11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 DDX58O95786 925 aaKnown RBP11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.53
ARHGEF28-206ENST00000504003 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 BTAF1O14981 1849 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 EVI5O60447 810 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 BCAR3O75815 825 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 TRIM37O94972 964 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 SIK1P57059 783 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
ARHGEF28-206ENST00000504003 ZNF831Q5JPB2 1677 aa11.69□□□□□ -0.54
ARHGEF28-206ENST00000504003 PDE3AQ14432 1141 aa11.69□□□□□ -0.54
ARHGEF28-206ENST00000504003 ATF7IPQ6VMQ6 1270 aa11.69□□□□□ -0.54
ARHGEF28-206ENST00000504003 DDX21Q9NR30 783 aaKnown RBP eCLIP11.69□□□□□ -0.54
ARHGEF28-206ENST00000504003 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
ARHGEF28-206ENST00000504003 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 MAP3K9P80192 1104 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 C5P01031 1676 aa11.68□□□□□ -0.54
ARHGEF28-206ENST00000504003 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 MFSD10Q14728 455 aa11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 DZIP1LQ8IYY4 767 aaKnown RBP11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF28-206ENST00000504003 PLSCR1O15162 318 aa11.66□□□□□ -0.54
ARHGEF28-206ENST00000504003 APBA3O96018 575 aa11.66□□□□□ -0.54
ARHGEF28-206ENST00000504003 MYL6BP14649 208 aa11.66□□□□□ -0.54
ARHGEF28-206ENST00000504003 FLIIQ13045 1269 aa11.66□□□□□ -0.54
ARHGEF28-206ENST00000504003 AAMPQ13685 434 aa11.66□□□□□ -0.54
ARHGEF28-206ENST00000504003 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
ARHGEF28-206ENST00000504003 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 GOLGA8CPA6NN73 597 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 PLIN1O60240 522 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 CYP19A1P11511 503 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 NEXNQ0ZGT2 675 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 LY75O60449 1722 aa11.65□□□□□ -0.54
ARHGEF28-206ENST00000504003 A0A087WZG4 1122 aa11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 TRIM27P14373 513 aa11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 BAG6P46379 1132 aa11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
ARHGEF28-206ENST00000504003 TJP1Q07157 1748 aa11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 A1BGP04217 495 aa11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 ARXQ96QS3 562 aa11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF28-206ENST00000504003 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 COPS6Q7L5N1 327 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 AK7Q96M32 723 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 ZBED2Q9BTP6 218 aa11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 RTCBQ9Y3I0 505 aaKnown RBP11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 COL5A3P25940 1745 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF28-206ENST00000504003 PTPN5P54829 565 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 PDIA6Q15084 440 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 TXNRD1Q16881 649 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 HSP90AB3PQ58FF7 597 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 PLBD2Q8NHP8 589 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 DNAAF4Q8WXU2 420 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms