RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 TP53INP1Q96A56 240 aa9.05□□□□□ -0.96
UBE3D-205ENST00000503942 UBE2OQ9C0C9 1292 aaKnown RBP9.05□□□□□ -0.96
UBE3D-205ENST00000503942 HCN4Q9Y3Q4 1203 aa9.05□□□□□ -0.96
UBE3D-205ENST00000503942 ILDR2Q71H61 639 aa9.04□□□□□ -0.96
UBE3D-205ENST00000503942 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
UBE3D-205ENST00000503942 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
UBE3D-205ENST00000503942 CHMP3Q9Y3E7 222 aa9.04□□□□□ -0.96
UBE3D-205ENST00000503942 AFF1P51825 1210 aaKnown RBP9.03□□□□□ -0.96
UBE3D-205ENST00000503942 KRTAP19-1Q8IUB9 90 aa9.03□□□□□ -0.96
UBE3D-205ENST00000503942 NUDT8Q8WV74 236 aa9.03□□□□□ -0.96
UBE3D-205ENST00000503942 EFCC1Q9HA90 598 aa9.03□□□□□ -0.96
UBE3D-205ENST00000503942 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
UBE3D-205ENST00000503942 USP21Q9UK80 565 aa9.03□□□□□ -0.96
UBE3D-205ENST00000503942 CCDC102BQ68D86 513 aa9.02□□□□□ -0.97
UBE3D-205ENST00000503942 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.97
UBE3D-205ENST00000503942 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
UBE3D-205ENST00000503942 M0R2N6 131 aa9.01□□□□□ -0.97
UBE3D-205ENST00000503942 ZBTB7BO15156 539 aaPredicted RBP9.01□□□□□ -0.97
UBE3D-205ENST00000503942 PSAPL1Q6NUJ1 521 aa9.01□□□□□ -0.97
UBE3D-205ENST00000503942 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
UBE3D-205ENST00000503942 IGFLR1Q9H665 355 aa9.01□□□□□ -0.97
UBE3D-205ENST00000503942 DNAJB12Q9NXW2 375 aaKnown RBP9.01□□□□□ -0.97
UBE3D-205ENST00000503942 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
UBE3D-205ENST00000503942 BTBD11A6QL63 1104 aa9□□□□□ -0.97
UBE3D-205ENST00000503942 ATP1A2P50993 1020 aa9□□□□□ -0.97
UBE3D-205ENST00000503942 CLDN10P78369 228 aa9□□□□□ -0.97
UBE3D-205ENST00000503942 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
UBE3D-205ENST00000503942 DMRTC2Q8IXT2 367 aaPredicted RBP8.99□□□□□ -0.97
UBE3D-205ENST00000503942 KRTAP9-9Q9BYP9 154 aa8.99□□□□□ -0.97
UBE3D-205ENST00000503942 KRTAP9-4Q9BYQ2 154 aa8.99□□□□□ -0.97
UBE3D-205ENST00000503942 C21orf2O43822 256 aa8.98□□□□□ -0.97
UBE3D-205ENST00000503942 HIF1AQ16665 826 aa8.98□□□□□ -0.97
UBE3D-205ENST00000503942 DTWD1Q8N5C7 304 aa8.98□□□□□ -0.97
UBE3D-205ENST00000503942 RNF112Q9ULX5 631 aa8.98□□□□□ -0.97
UBE3D-205ENST00000503942 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 PPP1R12BO60237 982 aaPredicted RBP8.97□□□□□ -0.97
UBE3D-205ENST00000503942 RGS9O75916 674 aaPredicted RBP8.97□□□□□ -0.97
UBE3D-205ENST00000503942 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 ALDH16A1Q8IZ83 802 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 GSX2Q9BZM3 304 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 GOLGA2P5Q9HBQ8 144 aa8.97□□□□□ -0.97
UBE3D-205ENST00000503942 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.97□□□□□ -0.97
UBE3D-205ENST00000503942 IER5Q5VY09 327 aa8.96□□□□□ -0.98
UBE3D-205ENST00000503942 STAG2Q8N3U4 1231 aa8.96□□□□□ -0.98
UBE3D-205ENST00000503942 LARGE2Q8N3Y3 721 aa8.96□□□□□ -0.98
UBE3D-205ENST00000503942 TSEN2Q8NCE0 465 aaKnown RBP8.96□□□□□ -0.98
UBE3D-205ENST00000503942 WFDC12Q8WWY7 111 aa8.96□□□□□ -0.98
UBE3D-205ENST00000503942 PNMA5Q96PV4 448 aa8.96□□□□□ -0.98
UBE3D-205ENST00000503942 NFKB1P19838 968 aa8.95□□□□□ -0.98
UBE3D-205ENST00000503942 MSL1Q68DK7 614 aa8.95□□□□□ -0.98
UBE3D-205ENST00000503942 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
UBE3D-205ENST00000503942 SIX5Q8N196 739 aa8.95□□□□□ -0.98
UBE3D-205ENST00000503942 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
UBE3D-205ENST00000503942 CCINQ13939 588 aa8.94□□□□□ -0.98
UBE3D-205ENST00000503942 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
UBE3D-205ENST00000503942 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
UBE3D-205ENST00000503942 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
UBE3D-205ENST00000503942 NOS3P29474 1203 aa8.93□□□□□ -0.98
UBE3D-205ENST00000503942 IREB2P48200 963 aaKnown RBP8.93□□□□□ -0.98
UBE3D-205ENST00000503942 GRIK5Q16478 980 aa8.93□□□□□ -0.98
UBE3D-205ENST00000503942 MCTP1Q6DN14 999 aa8.93□□□□□ -0.98
UBE3D-205ENST00000503942 FAM35AQ86V20 835 aa8.93□□□□□ -0.98
UBE3D-205ENST00000503942 PCSK7Q16549 785 aa8.92□□□□□ -0.98
UBE3D-205ENST00000503942 ADAMTS19Q8TE59 1207 aa8.92□□□□□ -0.98
UBE3D-205ENST00000503942 LPIN3Q9BQK8 851 aa8.92□□□□□ -0.98
UBE3D-205ENST00000503942 FRRS1LQ9P0K9 344 aa8.92□□□□□ -0.98
UBE3D-205ENST00000503942 TGFBR3LH3BV60 316 aa8.91□□□□□ -0.98
UBE3D-205ENST00000503942 DKK1O94907 266 aa8.91□□□□□ -0.98
UBE3D-205ENST00000503942 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
UBE3D-205ENST00000503942 MEGF10Q96KG7 1140 aa8.91□□□□□ -0.98
UBE3D-205ENST00000503942 UCN2Q96RP3 112 aa8.91□□□□□ -0.98
UBE3D-205ENST00000503942 ATAD2Q6PL18 1390 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 ATP9BO43861 1147 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 CPB1P15086 417 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 RTN1Q16799 776 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 IGF2-ASQ6U949 168 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 PRR23CQ6ZRP0 262 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 NGLY1Q96IV0 654 aa8.9□□□□□ -0.98
UBE3D-205ENST00000503942 ZNF594Q96JF6 807 aaPredicted RBP8.9□□□□□ -0.98
UBE3D-205ENST00000503942 MKRN1Q9UHC7 482 aaKnown RBP8.9□□□□□ -0.98
UBE3D-205ENST00000503942 DMGDHQ9UI17 866 aaKnown RBP8.9□□□□□ -0.98
UBE3D-205ENST00000503942 GRNP28799 593 aaKnown RBP8.89□□□□□ -0.99
UBE3D-205ENST00000503942 FLIIQ13045 1269 aa8.89□□□□□ -0.99
UBE3D-205ENST00000503942 PERM1Q5SV97 790 aa8.89□□□□□ -0.99
UBE3D-205ENST00000503942 WFDC8Q8IUA0 241 aa8.89□□□□□ -0.99
UBE3D-205ENST00000503942 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
UBE3D-205ENST00000503942 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
UBE3D-205ENST00000503942 BCS1LQ9Y276 419 aa8.89□□□□□ -0.99
UBE3D-205ENST00000503942 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
UBE3D-205ENST00000503942 EPB42P16452 691 aa8.88□□□□□ -0.99
UBE3D-205ENST00000503942 PLAURQ03405 335 aa8.88□□□□□ -0.99
UBE3D-205ENST00000503942 TRPM4Q8TD43 1214 aa8.88□□□□□ -0.99
UBE3D-205ENST00000503942 TTC9Q92623 222 aa8.88□□□□□ -0.99
UBE3D-205ENST00000503942 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
UBE3D-205ENST00000503942 POM121CA8CG34 1229 aa8.87□□□□□ -0.99
UBE3D-205ENST00000503942 DEAF1O75398 565 aaPredicted RBP8.87□□□□□ -0.99
UBE3D-205ENST00000503942 ZFATQ9P243 1243 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms